Towards Scalable Cluster Auditing through Grammatical Inference over Provenance Graphs. - Wajih Ul Hassan; Mark Lemay; Nuraini Aguse; Adam Bates 001; Thomas Moyer (NDSS, 2018)

Summarizing the solution space in tumor phylogeny inference by multiple consensus trees. - Nuraini Aguse; Yuanyuan Qi; Mohammed El-Kebir (Bioinform., 2019)

PhyDOSE: Design of follow-up single-cell sequencing experiments of tumors. - Leah L. Weber; Nuraini Aguse; Nicholas Chia; Mohammed El-Kebir (PLoS Comput. Biol., 2020)