DisGeNET: from MySQL to Nanopublication, Modelling Gene-Disease Associations for the Semantic Web. - Núria Queralt-Rosinach; Laura Inés Furlong (SWAT4LS, 2012)

DisGeNET RDF: A Gene-Disease Association Linked Open Data Resource. - Núria Queralt-Rosinach; Laura Inés Furlong (SWAT4LS, 2013)

The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery. - Michel Dumontier; Christopher J. O. Baker; Joachim Baran; Alison Callahan; Leonid L. Chepelev; Jose Cruz-Toledo; Nicholas R. Del Rio; Geraint Duck; Laura Inés Furlong; Nichealla Keath; Dana Klassen; Jamie P. McCusker; et al. (J. Biomed. Semant., 2014)

Exposing Provenance Metadata Using Different RDF Models. - Gang Fu; Evan Bolton; Núria Queralt-Rosinach; Laura Inés Furlong; Vinh Nguyen; Amit P. Sheth; Olivier Bodenreider; Michel Dumontier (SWAT4LS, 2015)

DisGeNET: a discovery platform for the dynamical exploration of human diseases and their genes. - Janet Piñero González; Núria Queralt-Rosinach; Àlex Bravo; Jordi Deu-Pons; Anna Bauer-Mehren; Martin Baron; Ferran Sanz; Laura Inés Furlong (Database J. Biol. Databases Curation, 2015)

Extraction of relations between genes and diseases from text and large-scale data analysis: implications for translational research. - Àlex Bravo; Janet Piñero González; Núria Queralt-Rosinach; Michael Rautschka; Laura Inés Furlong (BMC Bioinform., 2015)

On Reasoning with RDF Statements about Statements using Singleton Property Triples. - Vinh Nguyen; Olivier Bodenreider; Krishnaprasad Thirunarayan; Gang Fu; Evan Bolton; Núria Queralt Rosinach; Laura Inés Furlong; Michel Dumontier; Amit P. Sheth (CoRR, 2015)

Linking Wikidata to the Rest of the Semantic Web. - Andra Waagmeester; Egon L. Willighagen; Núria Queralt Rosinach; Elvira Mitraka; Sebastian Burgstaller-Muehlbacher; Tim E. Putman; Julia Turner; Lynn M. Schriml; Paul Pavlidis; Andrew I. Su; Benjamin M. Good (SWAT4LS, 2016)

DisGeNET-RDF: harnessing the innovative power of the Semantic Web to explore the genetic basis of diseases. - Núria Queralt-Rosinach; Janet Piñero González; Àlex Bravo; Ferran Sanz; Laura I. Furlong (Bioinform., 2016)

Decentralized provenance-aware publishing with nanopublications. - Tobias Kuhn; Christine Chichester; Michael Krauthammer; Núria Queralt-Rosinach; Ruben Verborgh; George Giannakopoulos; Axel-Cyrille Ngonga Ngomo; Raffaele Viglianti; Michel Dumontier (PeerJ Prepr., 2016)

Publishing DisGeNET as nanopublications. - Núria Queralt-Rosinach; Tobias Kuhn; Christine Chichester; Michel Dumontier; Ferran Sanz; Laura I. Furlong (Semantic Web, 2016)

Reliable Granular References to Changing Linked Data. - Tobias Kuhn; Egon L. Willighagen; Chris T. A. Evelo; Núria Queralt-Rosinach; Emilio Centeno; Laura I. Furlong (ISWC (1), 2017)

Neuro-symbolic representation learning on biological knowledge graphs. - Mona Alshahrani; Mohammad Asif Khan 001; Omar Maddouri; Akira R. Kinjo; Núria Queralt-Rosinach; Robert Hoehndorf (Bioinform., 2017)

Data Science and symbolic AI: Synergies, challenges and opportunities. - Robert Hoehndorf; Núria Queralt-Rosinach (Data Sci., 2017)

DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants. - Janet Piñero González; Àlex Bravo; Núria Queralt-Rosinach; Alba Gutiérrez-Sacristán; Jordi Deu-Pons; Emilio Centeno; Javier García-García 002; Ferran Sanz; Laura I. Furlong (Nucleic Acids Res., 2017)

Nanopublications: A Growing Resource of Provenance-Centric Scientific Linked Data. - Tobias Kuhn; Albert Meroño-Peñuela; Alexander Malic; Jorrit H. Poelen; Allen H. Hurlbert; Emilio Centeno Ortiz; Laura I. Furlong; Núria Queralt-Rosinach; Christine Chichester; Juan M. Banda; Egon L. Willighagen; Friederike Ehrhart; et al. (eScience, 2018)

Time-resolved evaluation of compound repositioning predictions on a text-mined knowledge network. - Michael Mayers; Tong Shu Li; Núria Queralt-Rosinach; Andrew I. Su (BMC Bioinform., 2019)

FAIR Data Management to Access Patient Data. - Núria Queralt Rosinach; Rajaram Kaliyaperumal; César Henrique Bernabé; Qinqin Long; Henk Jan van der Wijk; Barend Mons; Marco Roos (DaMaLOS, 2020)

Structured reviews for data and knowledge-driven research. - Núria Queralt-Rosinach; Gregory S. Stupp; Tong Shu Li; Michael Mayers; Maureen E. Hoatlin; Matthew Might; Benjamin M. Good; Andrew I. Su (Database J. Biol. Databases Curation, 2020)

BioHackathon 2015: Semantics of data for life sciences and reproducible research. - Rutger A. Vos; Toshiaki Katayama; Hiroyuki Mishima; Shin Kawano; Shuichi Kawashima; Jin-Dong Kim; Yuki Moriya; Toshiaki Tokimatsu; Atsuko Yamaguchi; Yasunori Yamamoto; Hongyan Wu; Peter Amstutz; et al. (F1000Research, 2020)

Enabling FAIR Discovery of Rare Disease Digital Resources. - Rajaram Kaliyaperumal; Núria Queralt Rosinach; Kees Burger; Luiz Olavo Bonino da Silva Santos; Marc Hanauer; Marco Roos (dHealth, 2021)

LUMC Clinical Ontology for Biomedical Research. - Núria Queralt-Rosinach; César Henrique Bernabé; Qinqin Long; Rajaram Kaliyaperumal; Marco Roos (ICBO, 2021)

Reuse of Design Pattern Measurements for Health Data. - Núria Queralt-Rosinach; Mark D. Wilkinson; Rajaram Kaliyaperumal; César Henrique Bernabé; Qinqin Long; Michel Dumontier; Paul N. Schofield; Marco Roos (JOWO, 2021)

The Use of Foundational Ontologies in Bioinformatics. - César Henrique Bernabé; Núria Queralt-Rosinach; Vítor E. Silva Souza; Luiz Olavo Bonino da Silva Santos; Annika Jacobsen; Barend Mons; Marco Roos (SWAT4HCLS, 2022)

Phenopackets for the Semantic Web. - Rajaram Kaliyaperumal; Gurnoor Singh; Núria Queralt-Rosinach; Jumamurat Bayjanov; Peter Bram 't Hoen; Marco Roos (SWAT4HCLS, 2022)

A Simple Standard for Sharing Ontological Mappings (SSSOM). - Nicolas Matentzoglu; James P. Balhoff; Susan M. Bello; Chris Bizon; Matthew H. Brush; Tiffany J. Callahan; Christopher G. Chute; William D. Duncan; Chris T. A. Evelo; Davera Gabriel; John B. Graybeal; Alasdair J. G. Gray; et al. (Database J. Biol. Databases Curation, 2022)

Design and application of a knowledge network for automatic prioritization of drug mechanisms. - Michael Mayers; Roger Tu; Dylan Steinecke; Tong Shu Li; Núria Queralt-Rosinach; Andrew I. Su (Bioinform., 2022)

Semantic modelling of common data elements for rare disease registries, and a prototype workflow for their deployment over registry data. - Rajaram Kaliyaperumal; Mark D. Wilkinson; Pablo Alarcón Moreno; Nirupama Benis; Ronald Cornet; Bruna dos Santos Vieira; Michel Dumontier; César Henrique Bernabé; Annika Jacobsen; Clémence M. A. Le Cornec; Mario Prieto Godoy; Núria Queralt-Rosinach; et al. (J. Biomed. Semant., 2022)

Applying the FAIR principles to data in a hospital: challenges and opportunities in a pandemic. - Núria Queralt-Rosinach; Rajaram Kaliyaperumal; César Henrique Bernabé; Qinqin Long; Simone A. Joosten; Henk Jan van der Wijk; Erik Flikkenschild; Kees Burger; Annika Jacobsen; Barend Mons; Marco Roos (J. Biomed. Semant., 2022)

A formalization of one of the main claims of "Mutations in NGLY1 cause an inherited disorder of the endoplasmic reticulum-associated degradation pathway" by Enns et al. 20141. - Núria Queralt-Rosinach (Data Sci., 2022)

Structured review on Huntington's disease iron hypothesis. - Karolis Cremers; Marco Roos; Katy Wolstencroft; Eleni Mina; Núria Queralt-Rosinach (SWAT4HCLS, 2023)

FAIRification and semantic modelling for Duchenne and Becker Muscular Dystrophy rare diseases. - Pablo Perdomo-Quinteiro; Sergiu Siminiuc; Paraskevi Sakellariou; Marco Roos; Pietro Spitali; Núria Queralt-Rosinach (SWAT4HCLS, 2023)

Updating the CEMO ontology for future epidemiological challenges. - Núria Queralt-Rosinach; Paul N. Schofield; Marco Roos; Robert Hoehndorf (SWAT4HCLS, 2023)

The use of foundational ontologies in biomedical research. - César Henrique Bernabé; Núria Queralt-Rosinach; Vítor E. Silva Souza; Luiz Olavo Bonino da Silva Santos; Barend Mons; Annika Jacobsen; Marco Roos (J. Biomed. Semant., 2023)

Updating the SynthDNASim tool to create diverse synthetic DNA datasets. - Caitlin Jenster; Rick Overkleeft; Núria Queralt Rosinach (SWAT4HCLS, 2024)

Automated drug repurposing workflow for rare diseases. - Carmen A. T. Reep; Katherine Wolstencroft; Eleni Mina; Núria Queralt-Rosinach (SWAT4HCLS, 2024)

Synthetic data: How could it be used for infectious disease research? - Styliani-Christina Fragkouli; Dhwani Solanki; Leyla Jael Castro; Fotis E. Psomopoulos; Núria Queralt-Rosinach; Davide Cirillo; Lisa C. Crossman (CoRR, 2024)

Building Expertise on FAIR Through Evolving Bring Your Own Data (BYOD) Workshops: Describing the Data, Software, and Management-focused Approaches and Their Evolution. - César Henrique Bernabé; Lieze Thielemans; Rajaram Kaliyaperumal; Claudio Carta; Shuxin Zhang; Celia W. G. van Gelder; Nirupama Benis; Luiz Olavo Bonino da Silva Santos; Ronald Cornet; Bruna dos Santos Vieira; Nawel Lalout; Inês Henriques; et al. (Data Intell., 2024)

Restructuring Knowledge Graphs with Conceptual Models: Implications for Machine Learning Predictions in Drug Repurposing. - César Bernabé; Rosa Zwart; Pablo Perdomo-Quinteiro; Annika Jacobsen; Tiago Prince Sales; Núria Queralt-Rosinach; Katherine Wolstencroft; Luiz Olavo Bonino da Silva Santos; Barend Mons; Marco Roos (CAiSE (2), 2025)