PipeAlign: a new toolkit for protein family analysis. - Frédéric Plewniak; Laurent Bianchetti; Yann Brelivet; Annaick Carles; Frédéric Chalmel; Odile Lecompte; Thiebaut Mochel; Luc Moulinier; Arnaud Muller; Jean Muller; Veronique Prigent; Raymond Ripp; et al. (Nucleic Acids Res., 2003)

Valid: Validation of Protein Sequence Quality Based on Multiple Alignment Data. - Laurent Bianchetti; Julie Dawn Thompson; Odile Lecompte; Frédéric Plewniak; Olivier Poch (J. Bioinform. Comput. Biol., 2005)

ICDS database: interrupted CoDing sequences in prokaryotic genomes. - Emmanuel Perrodou; Caroline Deshayes; Jean Muller; Christine Schaeffer; Alain Van Dorsselaer; Raymond Ripp; Olivier Poch; Jean-Marc Reyrat; Odile Lecompte (Nucleic Acids Res., 2006)

OrthoInspector: comprehensive orthology analysis and visual exploration. - Benjamin Linard; Julie Dawn Thompson; Olivier Poch; Odile Lecompte (BMC Bioinform., 2011)

KD4v: comprehensible knowledge discovery system for missense variant. - Tien-Dao Luu; Alin Rusu; Vincent Walter; Benjamin Linard; Laetitia Poidevin; Raymond Ripp; Luc Moulinier; Jean Muller; Wolfgang Raffelsberger; Nicolas Wicker; Odile Lecompte; Julie Dawn Thompson; et al. (Nucleic Acids Res., 2012)

PARSEC: PAtteRn SEarch and Contextualization. - Alexis Allot; Yannick-Noël Anno; Laetitia Poidevin; Raymond Ripp; Olivier Poch; Odile Lecompte (Bioinform., 2013)

OrthoInspector 2.0: Software and database updates. - Benjamin Linard; Alexis Allot; Raphael Schneider; Can Morel; Raymond Ripp; Marc Bigler; Julie Dawn Thompson; Olivier Poch; Odile Lecompte (Bioinform., 2015)

PROBE: analysis and visualization of protein block-level evolution. - Arnaud Kress; Odile Lecompte; Olivier Poch; Julie Dawn Thompson (Bioinform., 2018)

OrthoInspector 3.0: open portal for comparative genomics. - Yannis Nevers; Arnaud Kress; Audrey Defosset; Raymond Ripp; Benjamin Linard; Julie Dawn Thompson; Olivier Poch; Odile Lecompte (Nucleic Acids Res., 2019)

The Quest for Orthologs benchmark service and consensus calls in 2020. - Adrian M. Altenhoff; Javier Garrayo-Ventas; Salvatore Cosentino; David Emms; Natasha M. Glover; Ana Hernández-Plaza; Yannis Nevers; Vicky Sundesha; Damian Szklarczyk; José María Fernández 001; Laia Codó; Quest for Orthologs Consortium; et al. (Nucleic Acids Res., 2020)

The Quest for Orthologs orthology benchmark service in 2022. - Yannis Nevers; Tamsin E. M. Jones; Dushyanth Jyothi; Bethan Yates; Meritxell Ferret; Laura Portell-Silva; Laia Codó; Salvatore Cosentino; Marina Marcet-Houben; Anna Vlasova; Laetitia Poidevin; Arnaud Kress; et al. (Nucleic Acids Res., 2022)

Real or fake? Measuring the impact of protein annotation errors on estimates of domain gain and loss events. - Arnaud Kress; Olivier Poch; Odile Lecompte; Julie Dawn Thompson (Frontiers Bioinform., 2023)