Functional Characterization of Transcription Factor Motifs Using Cross-species Comparison across Large Evolutionary Distances. - Jaebum Kim; Ryan Cunningham; Brian James; Stefan Wyder; Joshua D. Gibson; Oliver Niehuis; Evgeny M. Zdobnov; Hugh M. Robertson; Gene E. Robinson; John H. Werren; Saurabh Sinha (PLoS Comput. Biol., 2010)

Orthograph: a versatile tool for mapping coding nucleotide sequences to clusters of orthologous genes. - Malte Petersen; Karen Meusemann; Alexander Donath; Daniel Dowling; Shanlin Liu; Ralph S. Peters; Lars Podsiadlowski; Alexandros Vasilikopoulos; Xin Zhou; Bernhard Misof; Oliver Niehuis (BMC Bioinform., 2017)