Extraction of the Plane of Minimal Cross-Sectional Area of the Corpus Callosum Using Template-Driven Segmentation. - Neda Changizi; Ghassan Hamarneh; Omer Ishaq; Aaron D. Ward; Roger C. Tam (MICCAI (3), 2010)

Automated quantification of Zebrafish tail deformation for high-throughput drug screening. - Omer Ishaq; Joseph Negri; Mark-Anthony Bray; Alexandra Pacureanu; Randall T. Peterson; Carolina Wählby (ISBI, 2013)

An Evaluation of the Faster STORM Method for Super-resolution Microscopy. - Omer Ishaq; Johan Elf; Carolina Wählby (ICPR, 2014)

Image Analysis and Deep Learning for Applications in Microscopy. - Omer Ishaq (2016)

Bridging Histology and Bioinformatics - Computational Analysis of Spatially Resolved Transcriptomics. - Marco Mignardi; Omer Ishaq; Xiaoyan Qian; Carolina Wählby (Proc. IEEE, 2017)

Fingertip Video Dataset for Non-Invasive Diagnosis of Anemia Using ResNet-18 Classifier. - Humera Sabir; Kifayat Ullah Khan; Omer Ishaq; Abdulwahab Alazeb; Hanan Aljuaid; Asaad Algarni; Jeongmin Park (IEEE Access, 2024)