MASS: multiple structural alignment by secondary structures. - Oranit Dror; Hadar Benyamini; Ruth Nussinov; Haim J. Wolfson (ISMB (Supplement of Bioinformatics), 2003)

BioInfo3D: a suite of tools for structural bioinformatics. - Maxim Shatsky; Oranit Dror; Dina Schneidman-Duhovny; Ruth Nussinov; Haim J. Wolfson (Nucleic Acids Res., 2004)

ARTS: alignment of RNA tertiary structures. - Oranit Dror; Ruth Nussinov; Haim J. Wolfson (ECCB/JBI, 2005)

Discovery of Protein Substructures in EM Maps. - Keren Lasker; Oranit Dror; Ruth Nussinov; Haim J. Wolfson (WABI, 2005)

The ARTS web server for aligning RNA tertiary structures. - Oranit Dror; Ruth Nussinov; Haim J. Wolfson (Nucleic Acids Res., 2006)

EMatch: Discovery of High Resolution Structural Homologues of Protein Domains in Intermediate Resolution Cryo-EM Maps. - Keren Lasker; Oranit Dror; Maxim Shatsky; Ruth Nussinov; Haim J. Wolfson (IEEE ACM Trans. Comput. Biol. Bioinform., 2007)

Structural similarity of genetically interacting proteins. - Oranit Dror; Dina Schneidman-Duhovny; Alexandra Shulman-Peleg; Ruth Nussinov; Haim J. Wolfson; Roded Sharan (BMC Syst. Biol., 2008)

Deterministic Pharmacophore Detection via Multiple Flexible Alignment of Drug-Like Molecules. - Dina Schneidman-Duhovny; Oranit Dror; Yuval Inbar; Ruth Nussinov; Haim J. Wolfson (J. Comput. Biol., 2008)

PharmaGist: a webserver for ligand-based pharmacophore detection. - Dina Schneidman-Duhovny; Oranit Dror; Yuval Inbar; Ruth Nussinov; Haim J. Wolfson (Nucleic Acids Res., 2008)

Algorithms for molecular structure analysis - Oranit Dror (2008)

Novel Approach for Efficient Pharmacophore-Based Virtual Screening: Method and Applications. - Oranit Dror; Dina Schneidman-Duhovny; Yuval Inbar; Ruth Nussinov; Haim J. Wolfson (J. Chem. Inf. Model., 2009)

Multi-View Image-to-Image Translation Supervised by 3D Pose. - Idit Diamant; Oranit Dror; Hai Victor Habi; Arnon Netzer (CoRR, 2021)

HPTQ: Hardware-Friendly Post Training Quantization. - Hai Victor Habi; Reuven Peretz; Elad Cohen; Lior Dikstein; Oranit Dror; Idit Diamant; Roy H. Jennings; Arnon Netzer (CoRR, 2021)

Reconciling a Centroid-Hypothesis Conflict in Source-Free Domain Adaptation. - Idit Diamant; Roy H. Jennings; Oranit Dror; Hai Victor Habi; Arnon Netzer (CoRR, 2022)