CPFP: a central proteomics facilities pipeline. - David C. Trudgian; Benjamin Thomas; Simon J. McGowan; Benedikt M. Kessler; Mogjiborahman Salek; Oreste Acuto (Bioinform., 2010)

ProteoSign: an end-user online differential proteomics statistical analysis platform. - Georgios Efstathiou; Andreas N. Antonakis; Georgios A. Pavlopoulos; Theodosios Theodosiou; Peter Divanach; David C. Trudgian; Benjamin Thomas; Nikolas Papanikolaou; Michalis Aivaliotis; Oreste Acuto; Ioannis Iliopoulos (Nucleic Acids Res., 2017)

ProteoSign v2: a faster and evolved user-friendly online tool for statistical analyses of differential proteomics. - Evangelos Theodorakis; Andreas N. Antonakis; Ismini Baltsavia; Georgios A. Pavlopoulos; Martina Samiotaki; Grigoris D. Amoutzias; Theodosios Theodosiou; Oreste Acuto; Georgios Efstathiou; Ioannis Iliopoulos (Nucleic Acids Res., 2021)

Multi-scale simulations of the T cell receptor reveal its lipid interactions, dynamics and the arrangement of its cytoplasmic region. - Dheeraj Prakaash; Graham P. Cook; Oreste Acuto; Antreas C. Kalli (PLoS Comput. Biol., 2021)