Parameter estimation using Simulated Annealing for S-system models of biochemical networks. - Orland R. Gonzalez; Christoph Küper; Kirsten Jung; Prospero C. Naval Jr.; Eduardo Mendoza (Bioinform., 2007)

Assigning functional linkages to proteins using phylogenetic profiles and continuous phenotypes. - Orland R. Gonzalez; Ralf Zimmer (Bioinform., 2008)

Systems Analysis of Bioenergetics and Growth of the Extreme Halophile Halobacterium salinarum. - Orland R. Gonzalez; Susanne Gronau; Friedhelm Pfeiffer; Eduardo Mendoza; Ralf Zimmer; Dieter Oesterhelt (PLoS Comput. Biol., 2009)

Characterization of Growth and Metabolism of the Haloalkaliphile Natronomonas pharaonis. - Orland R. Gonzalez; Tanja Oberwinkler; Locedie Mansueto; Friedhelm Pfeiffer; Eduardo Mendoza; Ralf Zimmer; Dieter Oesterhelt (PLoS Comput. Biol., 2010)

Contextual analysis of RNAi-based functional screens using interaction networks. - Orland R. Gonzalez; Ralf Zimmer (Bioinform., 2011)