PRODOC: a resource for the comparison of tethered protein domain architectures with in-built information on remotely related domain families. - Oruganty Krishnadev; N. Rekha; Shashi B. Pandit; S. Abhiman; Smita Mohanty; L. S. Swapna; Swanand P. Gore; Narayanaswamy Srinivasan (Nucleic Acids Res., 2005)

MulPSSM: a database of multiple position-specific scoring matrices of protein domain families. - V. S. Gowri; Oruganty Krishnadev; C. S. Swamy; Narayanaswamy Srinivasan (Nucleic Acids Res., 2006)

A Data Integration Approach to Predict Host-Pathogen Protein-Protein Interactions: Application to Recognize Protein Interactions between Human and a Malarial Parasite. - Oruganty Krishnadev; Narayanaswamy Srinivasan (Silico Biol., 2008)

Prediction of Protein-Protein Interactions Between Human Host and Two Mycobacterial Organisms. - Oruganty Krishnadev; Shveta Bisht; Narayanaswamy Srinivasan (Int. J. Knowl. Discov. Bioinform., 2010)

AlignHUSH : Alignment of HMMs Using Structure and Hydrophobicity information. - Oruganty Krishnadev; Narayanaswamy Srinivasan (BMC Bioinform., 2011)

Influence of Genomic and Other Biological Data Sets in the Understanding of Protein Structures, Functions and Interactions. - Narayanaswamy Srinivasan; Garima Agarwal; Ramachandra M. Bhaskara; Rupali A. Gadkari; Oruganty Krishnadev; B. Lakshmi; Swapnil Mahajan; Smita Mohanty; Richa Mudgal; R. Rakshambikai; Sankaran Sandhya; G. Sudha; et al. (Int. J. Knowl. Discov. Bioinform., 2011)