Metabolic Reconstruction and Modeling of Nitrogen Fixation in Rhizobium etli. - Osbaldo Resendis-Antonio; Jennifer L. Reed; Sergio Encarnación; Julio Collado-Vides; Bernhard Ø. Palsson (PLoS Comput. Biol., 2007)

Proteomic patterns of cervical cancer cell lines, a network perspective. - Juan Higareda-Almaraz; María Enríquez-Gasca; Magdalena Hernández-Ortiz; Osbaldo Resendis-Antonio; Sergio Encarnación-Guevara (BMC Syst. Biol., 2011)

Systems biology of bacterial nitrogen fixation: High-throughput technology and its integrative description with constraint-based modeling. - Osbaldo Resendis-Antonio; Magdalena Hernández; Emmanuel Salazar; Sandra Contreras; Gabriel Batallar; Yolanda Mora; Sergio Encarnación (BMC Syst. Biol., 2011)

Functional Modules, Structural Topology, and Optimal Activity in Metabolic Networks. - Osbaldo Resendis-Antonio; Magdalena Hernández; Yolanda Mora; Sergio Encarnación (PLoS Comput. Biol., 2012)

mb-PHENIX: diffusion and supervised uniform manifold approximation for denoizing microbiota data. - Cristian Padron-Manrique; Aarón Vázquez-Jiménez; Diego Armando Esquivel-Hernandez; Yoscelina Estrella Martinez Lopez; Daniel Neri-Rosario; Jean Paul Sánchez-Castañeda; David Giron-Villalobos; Osbaldo Resendis-Antonio (Bioinform., 2023)

Domain-Adversarial Neural Network and Explainable AI for Reducing Tissue-of-Origin Signal in Pan-cancer Mortality Classification. - Cristian Padron-Manrique; Juan José Oropeza Valdez; Osbaldo Resendis-Antonio (CoRR, 2025)