Label Consistent Multiclass Discriminative Dictionary Learning for MRI Segmentation. - Oualid M. Benkarim; Petia Radeva; Laura Igual (AMDO, 2014)

Discriminative Dimensionality Reduction for Patch-Based Label Fusion. - Gerard Sanroma; Oualid M. Benkarim; Gemma Piella; Guorong Wu 001; Xiaofeng Zhu 001; Dinggang Shen; Miguel Ángel González Ballester (MLMMI@ICML, 2015)

Enhanced Probabilistic Label Fusion by Estimating Label Confidences Through Discriminative Learning. - Oualid M. Benkarim; Gemma Piella; Miguel Ángel González Ballester; Gerard Sanroma (MICCAI (2), 2016)

Building an Ensemble of Complementary Segmentation Methods by Exploiting Probabilistic Estimates. - Gerard Sanroma; Oualid M. Benkarim; Gemma Piella; Miguel Ángel González Ballester (MLMI@MICCAI, 2016)

On the Role of Patch Spaces in Patch-Based Label Fusion. - Oualid M. Benkarim; Gemma Piella; Miguel Ángel González Ballester; Gerard Sanroma (Patch-MI@MICCAI, 2017)

Early Prediction of Alzheimer's Disease with Non-local Patch-Based Longitudinal Descriptors. - Gerard Sanroma; Víctor Andrea; Oualid M. Benkarim; José V. Manjón; Pierrick Coupé; Oscar Camara 001; Gemma Piella; Miguel Ángel González Ballester (Patch-MI@MICCAI, 2017)

Discriminative confidence estimation for probabilistic multi-atlas label fusion. - Oualid M. Benkarim; Gemma Piella; Miguel Ángel González Ballester; Gerard Sanroma (Medical Image Anal., 2017)

Fetal cortical parcellation based on growth patterns. - Jing Xia; Caiming Zhang 001; Fan Wang 023; Oualid M. Benkarim; Gerard Sanroma; Gemma Piella; Miguel Ángel González Ballester; Nadine Hahner; Elisenda Eixarch; Dinggang Shen; Gang Li 001 (ISBI, 2018)

Revealing Regional Associations of Cortical Folding Alterations with In Utero Ventricular Dilation Using Joint Spectral Embedding. - Oualid M. Benkarim; Gerard Sanroma; Gemma Piella; Islem Rekik; Nadine Hahner; Elisenda Eixarch; Miguel Ángel González Ballester; Dinggang Shen; Gang Li 001 (MICCAI (3), 2018)

Learning to combine complementary segmentation methods for fetal and 6-month infant brain MRI segmentation. - Gerard Sanroma; Oualid M. Benkarim; Gemma Piella; Karim Lekadir; Nadine Hahner; Elisenda Eixarch; Miguel Ángel González Ballester (Comput. Medical Imaging Graph., 2018)

Learning non-linear patch embeddings with neural networks for label fusion. - Gerard Sanroma; Oualid M. Benkarim; Gemma Piella; Oscar Camara 001; Guorong Wu 001; Dinggang Shen; Juan Domingo Gispert; José Luis Molinuevo; Miguel Ángel González Ballester; Alzheimer's Disease Neuroimaging Initiative (Medical Image Anal., 2018)

Multi-atlas segmentation and analysis of the fetal brain in ventriculomegaly. - Oualid M. Benkarim (2018)

Patch spaces and fusion strategies in patch-based label fusion. - Oualid M. Benkarim; Gemma Piella; Nadine Hahner; Elisenda Eixarch; Miguel Ángel González Ballester; Gerard Sanroma (Comput. Medical Imaging Graph., 2019)

Benchmark on Automatic Six-Month-Old Infant Brain Segmentation Algorithms: The iSeg-2017 Challenge. - Li Wang 026; Dong Nie; Guannan Li; Élodie Puybareau; Jose Dolz; Qian Zhang 066; Fan Wang 023; Jing Xia; Zhengwang Wu; Jiawei Chen 001; Kim-Han Thung; Toan Duc Bui; et al. (IEEE Trans. Medical Imaging, 2019)

Handling confounding variables in statistical shape analysis - application to cardiac remodelling. - Gabriel Bernardino; Oualid M. Benkarim; María Sanz-de la Garza; Susanna Prat-Gonzàlez; Álvaro Sepúlveda-Martínez; Fátima Crispi; Marta Sitges; Mathieu De Craene; Bart H. Bijnens; Miguel Ángel González Ballester (CoRR, 2020)

A novel approach to multiple anatomical shape analysis: Application to fetal ventriculomegaly. - Oualid M. Benkarim; Gemma Piella; Islem Rekik; Nadine Hahner; Elisenda Eixarch; Dinggang Shen; Gang Li 001; Miguel Ángel González Ballester; Gerard Sanroma (Medical Image Anal., 2020)

Handling confounding variables in statistical shape analysis - application to cardiac remodelling. - Gabriel Bernardino; Oualid M. Benkarim; María Sanz-de la Garza; Susanna Prat-Gonzàlez; Álvaro Sepúlveda-Martínez; Fátima Crispi; Marta Sitges; Constantine Butakoff; Mathieu De Craene; Bart H. Bijnens; Miguel Ángel González Ballester (Medical Image Anal., 2020)

The relationship between individual variation in macroscale functional gradients and distinct aspects of ongoing thought. - Brontë Mckeown; Will H. Strawson; Hao-Ting Wang; Theodoros Karapanagiotidis; Reinder Vos de Wael; Oualid M. Benkarim; Adam Turnbull; Daniel S. Margulies; Elizabeth Jefferies; Cade McCall; Boris C. Bernhardt; Jonathan Smallwood (NeuroImage, 2020)

Myeloarchitecture gradients in the human insula: Histological underpinnings and association to intrinsic functional connectivity. - Jessica Royer; Casey Paquola; Sara Larivière; Reinder Vos de Wael; Shahin Tavakol; Alexander J. Lowe; Oualid M. Benkarim; Alan C. Evans; Danilo Bzdok; Jonathan Smallwood; Birgit Frauscher; Boris C. Bernhardt (NeuroImage, 2020)

Signal diffusion along connectome gradients and inter-hub routing differentially contribute to dynamic human brain function. - Bo-yong Park; Reinder Vos de Wael; Casey Paquola; Sara Larivière; Oualid M. Benkarim; Jessica Royer; Shahin Tavakol; Raúl Rodríguez-Cruces; Qiongling Li; Sofie L. Valk; Daniel S. Margulies; Bratislav Misic; et al. (NeuroImage, 2021)

A Riemannian approach to predicting brain function from the structural connectome. - Oualid M. Benkarim; Casey Paquola; Bo-yong Park; Jessica Royer; Raúl Rodríguez-Cruces; Reinder Vos de Wael; Bratislav Misic; Gemma Piella; Boris C. Bernhardt (NeuroImage, 2022)

Micapipe: A pipeline for multimodal neuroimaging and connectome analysis. - Raúl Rodríguez-Cruces; Jessica Royer; Peer Herholz; Sara Larivière; Reinder Vos de Wael; Casey Paquola; Oualid M. Benkarim; Bo-yong Park; Janie Degré-Pelletier; Mark C. Nelson; Jordan DeKraker; Ilana R. Leppert; et al. (NeuroImage, 2022)

BrainStat: A toolbox for brain-wide statistics and multimodal feature associations. - Sara Larivière; Seyma Bayrak; Reinder Vos de Wael; Oualid M. Benkarim; Peer Herholz; Raúl Rodríguez-Cruces; Casey Paquola; Seok-Jun Hong; Bratislav Misic; Alan C. Evans; Sofie L. Valk; Boris C. Bernhardt (NeuroImage, 2023)

An automatic pipeline for atlas-based fetal and neonatal brain segmentation and analysis. - Andrea Urru; Ayako Nakaki; Oualid M. Benkarim; Francesca Crovetto; Laura Segalés; Valentin Comte; Nadine Hahner; Elisenda Eixarch; Eduard Gratacós; Fátima Crispi; Gemma Piella; Miguel Ángel González Ballester (Comput. Methods Programs Biomed., 2023)

Connectome-wide structure-function coupling models implicate polysynaptic alterations in autism. - Bo-yong Park; Oualid M. Benkarim; Clara F. Weber; Valeria Kebets; Serena Fett; Seulki Yoo; Adriana Di Martino; Michael P. Milham; Bratislav Misic; Sofie L. Valk; Seok-Jun Hong; Boris C. Bernhardt (NeuroImage, 2024)