ChatGPT Chemistry Assistant for Text Mining and Prediction of MOF Synthesis. - Zhiling Zheng; Oufan Zhang; Christian Borgs; Jennifer T. Chayes; Omar M. Yaghi (CoRR, 2023)

SPyCi-PDB: A modular command-line interface for back-calculating experimental datatypes of protein structures. - Zi Hao Liu; Oufan Zhang; João M. C. Teixeira; Jie Li 072; Teresa Head-Gordon; Julie D. Forman-Kay (Zenodo, 2023)

SPyCi-PDB: A modular command-line interface for back-calculating experimental datatypes of protein structures. - Zi Hao Liu; Oufan Zhang; João M. C. Teixeira; Jie Li 072; Teresa Head-Gordon; Julie D. Forman-Kay (J. Open Source Softw., 2023)

Local Disordered Region Sampling (LDRS) for ensemble modeling of proteins with experimentally undetermined or low confidence prediction segments. - Zi Hao Liu; João M. C. Teixeira; Oufan Zhang; Thomas E. Tsangaris; Jie Li 072; Claudiu C. Gradinaru; Teresa Head-Gordon; Julie D. Forman-Kay (Bioinform., 2023)

Mining for Potent Inhibitors through Artificial Intelligence and Physics: A Unified Methodology for Ligand Based and Structure Based Drug Design. - Jie Li 072; Oufan Zhang; Kunyang Sun; Yingze Wang; Xingyi Guan; Dorian Bagni; Mojtaba Haghighatlari; Fiona L. Kearns; Conor D. Parks; Rommie E. Amaro; Teresa Head-Gordon (J. Chem. Inf. Model., 2024)

Mean-variance optimization with inferred regimes. - Leonard C. MacLean; Yonggan Zhao; Oufan Zhang (Ann. Oper. Res., 2025)