Stability of the saccadic oculomotor system. - Dmitry Laptev; Ozgur E. Akman; Richard A. Clement (Biol. Cybern., 2006)

Nonlinear time series analysis of jerk congenital nystagmus. - Ozgur E. Akman; David S. Broomhead; Richard A. Clement; Richard V. Abadi (J. Comput. Neurosci., 2006)

Modelling Biological Clocks with Bio-PEPA: Stochasticity and Robustness for the Neurospora crassa Circadian Network. - Ozgur E. Akman; Federica Ciocchetta; Andrea Degasperi; Maria Luisa Guerriero (CMSB, 2009)

Robustness from flexibility in the fungal circadian clock. - Ozgur E. Akman; David A. Rand; Paul E. Brown; Andrew J. Millar (BMC Syst. Biol., 2010)

Complementary approaches to understanding the plant circadian clock - Ozgur E. Akman; Maria Luisa Guerriero; Laurence Loewe; Carl Troein (FBTC, 2010)

On the role of ultrasensitivity in biomolecular control systems. - Francesco Montefusco; Arno Steinacher; Ozgur E. Akman; Declan G. Bates; Orkun S. Soyer (CDC, 2012)

SBSI: an extensible distributed software infrastructure for parameter estimation in systems biology. - Richard R. Adams; Allan B. Clark; Azusa Yamaguchi; Neil Hanlon; Nikos Tsorman; Shakir Ali; Galina Lebedeva; Alexey N. Goltsov; Anatoly A. Sorokin; Ozgur E. Akman; Carl Troein; Andrew J. Millar; et al. (Bioinform., 2013)

Nested sampling for parameter inference in systems biology: application to an exemplar circadian model. - Stuart Aitken; Ozgur E. Akman (BMC Syst. Biol., 2013)

A consensus approach to predict regulatory interactions. - Suhaib Mohammed; Ozgur E. Akman; Zheng Rong Yang (BMEI, 2014)

Dizzy-Beats: a Bayesian evidence analysis tool for systems biology. - Stuart Aitken; Alastair M. Kilpatrick; Ozgur E. Akman (Bioinform., 2015)

On the exploitation of search history and accumulative sampling in robust optimisation. - Khulood AlYahya; Kevin Anthony James Doherty; Jonathan E. Fieldsend; Ozgur E. Akman (GECCO (Companion), 2017)

Optimisation and landscape analysis of computational biology models: a case study. - Kevin Anthony James Doherty; Khulood AlYahya; Ozgur E. Akman; Jonathan E. Fieldsend (GECCO (Companion), 2017)

Optimisation of an exemplar oculomotor model using multi-objective genetic algorithms executed on a GPU-CPU combination. - Eleftherios Avramidis; Ozgur E. Akman (BMC Syst. Biol., 2017)

Robust multi-modal optimisation. - Khulood AlYahya; Kevin Anthony James Doherty; Ozgur E. Akman; Jonathan E. Fieldsend (GECCO (Companion), 2018)

Voronoi-based archive sampling for robust optimisation. - Kevin Anthony James Doherty; Khulood AlYahya; Jonathan E. Fieldsend; Ozgur E. Akman (GECCO (Companion), 2018)

Landscape analysis under measurement error. - Khulood AlYahya; Ozgur E. Akman; Jonathan E. Fieldsend (GECCO (Companion), 2019)

Slow-fast control of eye movements: an instance of Zeeman's model for an action. - Richard A. Clement; Ozgur E. Akman (Biol. Cybern., 2020)

A simplified modelling framework facilitates more complex representations of plant circadian clocks. - Mathias Foo; Declan G. Bates; Ozgur E. Akman (PLoS Comput. Biol., 2020)

SODECL: An Open-Source Library for Calculating Multiple Orbits of a System of Stochastic Differential Equations in Parallel. - Eleftherios Avramidis; Marta Lalik; Ozgur E. Akman (ACM Trans. Math. Softw., 2020)

Towards population-based fitness landscape analysis using local optima networks. - Melike D. Karatas; Ozgur E. Akman; Jonathan E. Fieldsend (GECCO Companion, 2021)

Reduced Models of Gene Regulatory Networks: Visualising Multi-modal Landscapes. - Khulood AlYahya; Kevin A. J. Doherty; Ozgur E. Akman; Jonathan E. Fieldsend (Metaheuristics for Finding Multiple Solutions, 2021)

BDEtools: A MATLAB Package for Boolean Delay Equation Modeling. - Ozgur E. Akman; Kevin Doherty; Benjamin J. Wareham (J. Comput. Biol., 2023)

Global nonlinear approach for mapping parameters of neural mass models. - Dominic M. Dunstan; Mark P. Richardson; Eugenio Abela; Ozgur E. Akman; Marc Goodfellow (PLoS Comput. Biol., 2023)