SEAGENT: a platform for developing semantic web based multi agent systems. - Oguz Dikenelli; Riza Cenk Erdur; Özgür Gümüs (AAMAS, 2005)

Developing Multi Agent Systems on Semantic Web Environment Using SEAGENT Platform. - Oguz Dikenelli; Riza Cenk Erdur; Geylani Kardas; Özgür Gümüs; Inanç Seylan; Önder Gürcan; Ali Murat Tiryaki; Erdem Eser Ekinci (ESAW, 2005)

A Pervasive Environment for Location-Aware and Semantic Matching Based Information Gathering. - Riza Cenk Erdur; Oguz Dikenelli; Ata Önal; Özgür Gümüs; Geylani Kardas; Özgün Bayrak; Yusuf Engin Tetik (ISCIS, 2005)

Applying Semantic Capability Matching into Directory Service Structures of Multi Agent Systems. - Geylani Kardas; Özgür Gümüs; Oguz Dikenelli (ISCIS, 2005)

Engineering a Multi Agent Platform with Dynamic Semantic Service Discovery and Invocation Capability. - Oguz Dikenelli; Özgür Gümüs; Ali Murat Tiryaki; Geylani Kardas (MATES, 2005)

A Planner for Implementing Semantic Service Agents based on Semantic Web Services Initiative Architecture. - Önder Gürcan; Geylani Kardas; Özgür Gümüs; Erdem Eser Ekinci; Oguz Dikenelli (EUMAS, 2006)

SMOP: A Semantic Web and Service Driven Information Gathering Environment for Mobile Platforms. - Özgür Gümüs; Geylani Kardas; Oguz Dikenelli; Riza Cenk Erdur; Ata Önal (OTM Conferences (1), 2006)

Engineering an MAS Platform for Semantic Service Integration Based on the SWSA. - Özgür Gümüs; Önder Gürcan; Geylani Kardas; Erdem Eser Ekinci; Oguz Dikenelli (OTM Workshops (1), 2007)

An MAS Infrastructure for Implementing SWSA Based Semantic Services. - Önder Gürcan; Geylani Kardas; Özgür Gümüs; Erdem Eser Ekinci; Oguz Dikenelli (SOCASE, 2007)

Towards a Broker Agent in the Semantic Services Environment. - Özgür Gümüs; Önder Gürcan; Oguz Dikenelli (SOCASE, 2008)

Anlamsal web servisleri ortamında bir aracı etmen tasarımı ve gerçekleştirimi (Design and implementation of a broker agent in the semantic web services environment) - Özgür Gümüs (2008)

Weighting Indirect Relations to Elucidate the Direct Association of SNP-Disease by Use of SPARQL Queries. - Remzi Çelebi; Özgür Gümüs; Yedim Aysin Son (SWAT4LS, 2013)

Prediction of Drug-Drug Interactions Using Pharmacological Similarities of Drugs. - Remzi Çelebi; Vahab Mostafapour; Erkan Yasar; Özgür Gümüs; Oguz Dikenelli (DEXA Workshops, 2015)

Evaluation of knowledge graph embedding approaches for drug-drug interaction prediction using Linked Open Data. - Remzi Çelebi; Erkan Yasar; Hüseyin Uyar; Özgür Gümüs; Oguz Dikenelli; Michel Dumontier (SWAT4LS, 2018)

Evaluation of knowledge graph embedding approaches for drug-drug interaction prediction in realistic settings. - Remzi Celebi; Hüseyin Uyar; Erkan Yasar; Özgür Gümüs; Oguz Dikenelli; Michel Dumontier (BMC Bioinform., 2019)

PredDRBP-MLP: Prediction of DNA-binding proteins and RNA-binding proteins by multilayer perceptron. - Ozgur Can Arican; Özgür Gümüs (Comput. Biol. Medicine, 2023)

Deep-Learning Based 3D Lung Segmentation. - Kerem Erciyes; Mustafa Soydan; Özgür Gümüs (ISDFS, 2025)