Word Sense Disambiguation for Information Retrieval. - Özlem Uzuner; Boris Katz; Deniz Yuret (AAAI/IAAI, 1999)

Sales Tax on the Internet: When and How to Tax? - Özlem Uzuner; Lee W. McKnight (HICSS, 2001)

Better Public Policy Through Natural Language Information Access. - Boris Katz; Roger Hurwitz; Jimmy Lin; Özlem Uzuner (DG.O, 2003)

START: A Framework for Facilitating E-Rulemaking. - Boris Katz; Roger Hurwitz; Jimmy Lin; Özlem Uzuner (DG.O, 2003)

Content and expression-based copy recognition for intellectual property protection. - Özlem Uzuner; Randall Davis (Digital Rights Management Workshop, 2003)

Using Empirical Methods for Evaluating Expression and Content Similarity. - Özlem Uzuner; Randall Davis; Boris Katz (HICSS, 2004)

Answering Multiple Questions on a Topic From Heterogeneous Resources. - Boris Katz; Matthew W. Bilotti; Sue Felshin; Aaron Fernandes; Wesley Hildebrandt; Roni Katzir; Jimmy Lin; Daniel Loreto; Gregory Marton; Federico Mora 001; Özlem Uzuner (TREC, 2004)

Capturing Expression Using Linguistic Information. - Özlem Uzuner; Boris Katz (AAAI, 2005)

Lexical Chains and Sliding Locality Windows in Content-based Text Similarity Detection. - Thade Nahnsen; Özlem Uzuner; Boris Katz (IJCNLP (companion), 2005)

A Comparative Study of Language Models for Book and Author Recognition. - Özlem Uzuner; Boris Katz (IJCNLP, 2005)

External Knowledge Sources for Question Answering. - Boris Katz; Gregory Marton; Gary C. Borchardt; Alexis Brownell; Sue Felshin; Daniel Loreto; Jesse Louis-Rosenberg; Ben Lu; Federico Mora 001; Stephan Stiller; Özlem Uzuner; Angela Wilcox (TREC, 2005)

Syntactically-Informed Semantic Category Recognizer for Discharge Summaries. - Tawanda C. Sibanda; Tian He; Peter Szolovits; Özlem Uzuner (AMIA, 2006)

Role of Local Context in Automatic Deidentification of Ungrammatical, Fragmented Text. - Tawanda C. Sibanda; Özlem Uzuner (HLT-NAACL, 2006)

Linguistically informed digital fingerprints for text. - Özlem Uzuner (Security, Steganography, and Watermarking of Multimedia Contents, 2006)

Question Answering Experiments and Resources. - Boris Katz; Gregory Marton; Sue Felshin; Daniel Loreto; Ben Lu; Federico Mora 001; Özlem Uzuner; Michael McGraw-Herdeg; Natalie Cheung; Alexey Radul; Yuan Kui Shen; Yuan Luo 001; et al. (TREC, 2006)

Stylistics for text retrieval in practice: SIGIR 2006 workshop, Seattle, August 10, 2006. - Özlem Uzuner; Shlomo Argamon; Jussi Karlgren (SIGIR Forum, 2006)

Three Approaches to Automatic Assignment of ICD-9-CM Codes to Radiology Reports. - Ira Goldstein; Anna Arzumtsyan; Özlem Uzuner (AMIA, 2007)

Viewpoint Paper: Evaluating the State-of-the-Art in Automatic De-identification. - Özlem Uzuner; Yuan Luo 001; Peter Szolovits (J. Am. Medical Informatics Assoc., 2007)

Two Approaches to Assertion Classification. - Özlem Uzuner; Xiaoran Zhang; Tawanda C. Sibanda (AMIA, 2008)

A de-identifier for medical discharge summaries. - Özlem Uzuner; Tawanda C. Sibanda; Yuan Luo 001; Peter Szolovits (Artif. Intell. Medicine, 2008)

Letters to the Editor: No Structure Before Its Time. - Isaac S. Kohane; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2008)

Viewpoint Paper: Identifying Patient Smoking Status from Medical Discharge Records. - Özlem Uzuner; Ira Goldstein; Yuan Luo 001; Isaac S. Kohane (J. Am. Medical Informatics Assoc., 2008)

Role of preferred terminology in the classification of medical reports. - Ira Goldstein; Özlem Uzuner (ISCIS, 2009)

Viewpoint Paper: Recognizing Obesity and Comorbidities in Sparse Data. - Özlem Uzuner (J. Am. Medical Informatics Assoc., 2009)

Research Paper: Machine Learning and Rule-based Approaches to Assertion Classification. - Özlem Uzuner; Xiaoran Zhang; Tawanda C. Sibanda (J. Am. Medical Informatics Assoc., 2009)

Specializing for predicting obesity and its co-morbidities. - Ira Goldstein; Özlem Uzuner (J. Biomed. Informatics, 2009)

Extracting Medication Information from Discharge Summaries. - Scott R. Halgrim; Fei Xia 004; Imre Solti; Eithon Cadag; Özlem Uzuner (Louhi@NAACL-HLT, 2010)

Does negation really matter? - Ira Goldstein; Özlem Uzuner (NeSp-NLP@ACL, 2010)

Informational Support or Emotional Support: Preliminary Study of an Automated Approach to Analyze Online Support Community Contents. - Kuang-Yuan Huang; Priya Nambisan; Özlem Uzuner (ICIS, 2010)

Semantic relations for problem-oriented medical records. - Özlem Uzuner; Jonathan Mailoa; Russell Ryan; Tawanda C. Sibanda (Artif. Intell. Medicine, 2010)

Extracting medication information from clinical text. - Özlem Uzuner; Imre Solti; Eithon Cadag (J. Am. Medical Informatics Assoc., 2010)

Community annotation experiment for ground truth generation for the i2b2 medication challenge. - Özlem Uzuner; Imre Solti; Fei Xia 004; Eithon Cadag (J. Am. Medical Informatics Assoc., 2010)

A cascade of classifiers for extracting medication information from discharge summaries. - Scott R. Halgrim; Fei Xia 004; Imre Solti; Eithon Cadag; Özlem Uzuner (J. Biomed. Semant., 2011)

Overcoming barriers to NLP for clinical text: the role of shared tasks and the need for additional creative solutions. - Wendy Webber Chapman; Prakash M. Nadkarni; Lynette Hirschman; Leonard W. D'Avolio; Guergana K. Savova; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2011)

2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text. - Özlem Uzuner; Brett R. South; Shuying Shen; Scott L. DuVall (J. Am. Medical Informatics Assoc., 2011)

Using UMLS for Word Sense Disambiguation in Clinical Notes. - Anna Rumshisky; Rachel Chasin; Özlem Uzuner; Peter Szolovits (AMIA, 2012)

Evaluation and Visualization of Human Annotator Learning Patterns. - Ying Suo; Shuying Shen; Scott L. DuVall; Özlem Uzuner; Brett R. South (AMIA, 2012)

Supporters in Deed - Studying Online Support Provision from the Perspective of Social Capital. - Kuang-Yuan Huang; InduShobha N. Chengalur-Smith; Özlem Uzuner; Priya Nambisan; Namjoo Choi (ICIS, 2012)

MCORES: a system for noun phrase coreference resolution for clinical records. - Andreea Bodnari; Peter Szolovits; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2012)

Evaluating the state of the art in coreference resolution for electronic medical records. - Özlem Uzuner; Andreea Bodnari; Shuying Shen; Tyler Forbush; John Pestian; Brett R. South (J. Am. Medical Informatics Assoc., 2012)

Multilingual Named-Entity Recognition from Parallel Corpora. - Andreea Bodnari; Aurélie Névéol; Özlem Uzuner; Pierre Zweigenbaum; Peter Szolovits (CLEF (Working Notes), 2013)

Evaluating temporal relations in clinical text: 2012 i2b2 Challenge. - Weiyi Sun; Anna Rumshisky; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2013)

Temporal reasoning over clinical text: the state of the art. - Weiyi Sun; Anna Rumshisky; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2013)

Annotating temporal information in clinical narratives. - Weiyi Sun; Anna Rumshisky; Özlem Uzuner (J. Biomed. Informatics, 2013)

Chronology of your health events: Approaches to extracting temporal relations from medical narratives. - Özlem Uzuner; Amber Stubbs; Weiyi Sun (J. Biomed. Informatics, 2013)

Biomedical/Clinical NLP. - Özlem Uzuner; Meliha Yetisgen; Amber Stubbs (COLING (Tutorials), 2014)

Research and applications: Word sense disambiguation in the clinical domain: a comparison of knowledge-rich and knowledge-poor unsupervised methods. - Rachel Chasin; Anna Rumshisky; Özlem Uzuner; Peter Szolovits (J. Am. Medical Informatics Assoc., 2014)

Challenges in Synthesizing Surrogate PHI in Narrative EMRs. - Amber Stubbs; Özlem Uzuner; Christopher Kotfila; Ira Goldstein; Peter Szolovits (Medical Data Privacy Handbook, 2015)

State of the Art of Clinical Narrative Report De-Identification and Its Future. - Özlem Uzuner; John S. Aberdeen; Stéphane M. Meystre; Mehmet Kayaalp 002 (AMIA, 2015)

Introducing textual analysis tools for policy informatics: a case study of e-petitions. - Loni Hagen; Teresa M. Harrison; Özlem Uzuner; Tim Fake; Dan Lamanna; Christopher Kotfila (DG.O, 2015)

Understanding Citizens' Direct Policy Suggestions to the Federal Government: A Natural Language Processing and Topic Modeling Approach. - Loni Hagen; Özlem Uzuner; Christopher Kotfila; Teresa M. Harrison; Dan Lamanna (HICSS, 2015)

Subgraph augmented non-negative tensor factorization (SANTF) for modeling clinical narrative text. - Yuan Luo 001; Yu Xin; Ephraim P. Hochberg; Rohit Joshi; Özlem Uzuner; Peter Szolovits (J. Am. Medical Informatics Assoc., 2015)

Normalization of relative and incomplete temporal expressions in clinical narratives. - Weiyi Sun; Anna Rumshisky; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2015)

A systematic comparison of feature space effects on disease classifier performance for phenotype identification of five diseases. - Christopher Kotfila; Özlem Uzuner (J. Biomed. Informatics, 2015)

Creation of a new longitudinal corpus of clinical narratives. - Vishesh Kumar; Amber Stubbs; Stanley Y. Shaw; Özlem Uzuner (J. Biomed. Informatics, 2015)

Automated systems for the de-identification of longitudinal clinical narratives: Overview of 2014 i2b2/UTHealth shared task Track 1. - Amber Stubbs; Christopher Kotfila; Özlem Uzuner (J. Biomed. Informatics, 2015)

Identifying risk factors for heart disease over time: Overview of 2014 i2b2/UTHealth shared task Track 2. - Amber Stubbs; Christopher Kotfila; Hua Xu 001; Özlem Uzuner (J. Biomed. Informatics, 2015)

Annotating longitudinal clinical narratives for de-identification: The 2014 i2b2/UTHealth corpus. - Amber Stubbs; Özlem Uzuner (J. Biomed. Informatics, 2015)

Annotating risk factors for heart disease in clinical narratives for diabetic patients. - Amber Stubbs; Özlem Uzuner (J. Biomed. Informatics, 2015)

Practical applications for natural language processing in clinical research: The 2014 i2b2/UTHealth shared tasks. - Özlem Uzuner; Amber Stubbs (J. Biomed. Informatics, 2015)

Ease of adoption of clinical natural language processing software: An evaluation of five systems. - Kai Zheng 002; V. G. Vinod Vydiswaran; Yang Liu 019; Yue Wang 035; Amber Stubbs; Özlem Uzuner; Anupama E. Gururaj; Samuel Bayer; John S. Aberdeen; Anna Rumshisky; Serguei Pakhomov; Hongfang Liu; et al. (J. Biomed. Informatics, 2015)

Feature-Augmented Neural Networks for Patient Note De-identification. - Ji Young Lee 001; Franck Dernoncourt; Özlem Uzuner; Peter Szolovits (ClinicalNLP@COLING 2016, 2016)

Natural Language Processing Working Group Pre-Symposium: Graduate Student Consortium and 'Hackathon'. - Stéphane M. Meystre; Hongfang Liu; Rong Xu; Sivaram Arabandi; Kavishwar B. Wagholikar; Jon D. Patrick; Guergana K. Savova; Chunhua Weng; Pierre Zweigenbaum; Dina Demner-Fushman; Özlem Uzuner; Hua Xu 001 (AMIA, 2016)

E-petition popularity: Do linguistic and semantic factors matter? - Loni Hagen; Teresa M. Harrison; Özlem Uzuner; William May; Tim Fake; Satya Katragadda (Gov. Inf. Q., 2016)

Do Sentiments Matter in Fraud Detection? Estimating Semantic Orientation of Annual Reports. - Sunita Goel; Özlem Uzuner (Intell. Syst. Account. Finance Manag., 2016)

Extracting and Normalizing Adverse Drug Reactions from Drug Labels. - Carson Tao; Kahyun Lee; Michele Filannino; Kevin Buchan; Kathy Lee; Tilak Raj Arora; Joey Liu; Oladimeji Farri; Özlem Uzuner (TAC, 2017)

A Hybrid Approach to Precision Medicine-related Biomedical Article Retrieval and Clinical Trial Matching. - Yuan Ling; Sadid A. Hasan; Michele Filannino; Kevin P. Buchan; Kahyun Lee; Joey Liu; William Boag; Di Jin; Özlem Uzuner; Kathy Lee; Vivek V. Datla; Ashequl Qadir; et al. (TREC, 2017)

Bridging semantics and syntax with graph algorithms - state-of-the-art of extracting biomedical relations. - Yuan Luo 001; Özlem Uzuner; Peter Szolovits (Briefings Bioinform., 2017)

De-identification of patient notes with recurrent neural networks. - Franck Dernoncourt; Ji Young Lee 001; Özlem Uzuner; Peter Szolovits (J. Am. Medical Informatics Assoc., 2017)

Automatic prediction of coronary artery disease from clinical narratives. - Kevin Buchan; Michele Filannino; Özlem Uzuner (J. Biomed. Informatics, 2017)

Prescription extraction using CRFs and word embeddings. - Carson Tao; Michele Filannino; Özlem Uzuner (J. Biomed. Informatics, 2017)

Precision Medicine: matching cancer patients with clinical trials. - Michele Filannino; Kahyun Lee; Di Jin; Kevin Buchan; William Boag; Özlem Uzuner (AMIA, 2018)

Precision Medicine: matching cancer patients with relevant treatments. - Kahyun Lee; Michele Filannino; Di Jin; Kevin Buchan; William Boag; Özlem Uzuner (AMIA, 2018)

FABLE: A Semi-Supervised Prescription Information Extraction System. - Carson Tao; Michele Filannino; Özlem Uzuner (AMIA, 2018)

Extracting ADRs from Drug Labels using Bi-LSTM and CRFs. - Carson Tao; Michele Filannino; Özlem Uzuner (AMIA, 2018)

Segment convolutional neural networks (Seg-CNNs) for classifying relations in clinical notes. - Yuan Luo 001; Yu Cheng; Özlem Uzuner; Peter Szolovits; Justin Starren (J. Am. Medical Informatics Assoc., 2018)

Corrigendum to "Symptom severity prediction from neuropsychiatric clinical records: Overview of 2016 CEGS N-GRID shared tasks Track 2" [J Biomed Inform. 2017 Nov;75S: S62-S70]. - Michele Filannino; Amber Stubbs; Özlem Uzuner (J. Biomed. Informatics, 2018)

Automatic Identification of Social Determinants of Health from Clinical Records. - Kevin Lybarger; Mari Ostendorf; Özlem Uzuner; Meliha Yetisgen (AMIA, 2019)

Clinical Text Mining in Mental Health. - Jessica D. Tenenbaum; Ramakanth Kavuluru; Thomas H. McCoy; Özlem Uzuner; Sumithra Velupillai (AMIA, 2019)

An Empirical Test of GRUs and Deep Contextualized Word Representations on De-Identification. - Kahyun Lee; Michele Filannino; Özlem Uzuner (MedInfo, 2019)

An Exploratory Study on Pseudo-Data Generation in Prescription and Adverse Drug Reaction Extraction. - Carson Tao; Kahyun Lee; Michele Filannino; Özlem Uzuner (MedInfo, 2019)

Deep Learning for Identification of Adverse Effect Mentions In Twitter Data. - Paul Barry; Özlem Uzuner (SMM4H@ACL, 2019)

Extraction and Analysis of Clinically Important Follow-up Recommendations in a Large Radiology Dataset. - Wilson Lau; Thomas H. Payne; Özlem Uzuner; Meliha Yetisgen (CoRR, 2019)

Cohort selection for clinical trials: n2c2 2018 shared task track 1. - Amber Stubbs; Michele Filannino; Ergin Soysal; Samuel Henry 001; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2019)

New approaches to cohort selection. - Amber Stubbs; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2019)

Editorial: The second international workshop on health natural language processing (HealthNLP 2019). - Yanshan Wang; Hua Xu 001; Özlem Uzuner (BMC Medical Informatics Decis. Mak., 2019)

Jointly Learning Clinical Entities and Relations with Contextual Language Models and Explicit Context. - Paul Barry; Sam Henry 001; Meliha Yetisgen; Bridget T. McInnes; Özlem Uzuner (AMIA, 2020)

Medical Concept Normalization via Description Prediction. - Kahyun Lee; Sam Henry 001; Özlem Uzuner (AMIA, 2020)

A Novel Corpus With Detailed Annotations of Social Determinants of Health. - Kevin Lybarger; Elizabeth Chang; Kylie Kerker; Jolie Shen; Erica Qiao; Özlem Uzuner; Mari Ostendorf; Meliha Yetisgen (AMIA, 2020)

Deep Contextualized Word Embedding for Text-based Online User Profiling to Detect Social Bots on Twitter. - Maryam Heidari; James H. Jones; Özlem Uzuner (ICDM (Workshops), 2020)

A Multi-channel BiLSTM-CNN Model for Multilabel Emotion Classification of Informal Text. - Zahra Rajabi; Amarda Shehu; Özlem Uzuner (ICSC, 2020)

SalamNET at SemEval-2020 Task 12: Deep Learning Approach for Arabic Offensive Language Detection. - Fatemah Husain; Jooyeon Lee; Sam Henry 001; Özlem Uzuner (SemEval@COLING, 2020)

Ensemble BERT for Classifying Medication-mentioning Tweets. - Huong Dang; Kahyun Lee; Sam Henry 001; Özlem Uzuner (SMM4H@COLING, 2020)

SalamNET at SemEval-2020 Task12: Deep Learning Approach for Arabic Offensive Language Detection. - Fatemah Husain; Jooyeon Lee; Samuel Henry 001; Özlem Uzuner (CoRR, 2020)

Emerging clinical applications of text analytics. - Irena Spasic; Özlem Uzuner; Li Zhou 007 (Int. J. Medical Informatics, 2020)

2018 n2c2 shared task on adverse drug events and medication extraction in electronic health records. - Sam Henry 001; Kevin Buchan; Michele Filannino; Amber Stubbs; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2020)

The 2019 National Natural language processing (NLP) Clinical Challenges (n2c2)/Open Health NLP (OHNLP) shared task on clinical concept normalization for clinical records. - Sam Henry 001; Yanshan Wang; Feichen Shen; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2020)

Advancing the state of the art in automatic extraction of adverse drug events from narratives. - Özlem Uzuner; Amber Stubbs; Leslie Lenert (J. Am. Medical Informatics Assoc., 2020)

Adverse drug event detection using reason assignments in FDA drug labels. - Corey Sutphin; Kahyun Lee; Antonio Jimeno-Yepes; Özlem Uzuner; Bridget T. McInnes (J. Biomed. Informatics, 2020)

Emotion Detection of Textual Data: An Interdisciplinary Survey. - Samira Zad; Maryam Heidari; James H. Jones Jr.; Özlem Uzuner (AIIoT, 2021)

A Survey on Concept-Level Sentiment Analysis Techniques of Textual Data. - Samira Zad; Maryam Heidari; James H. Jones; Özlem Uzuner (AIIoT, 2021)

A New Corpus for Clinical Findings in Radiology Reports. - Wilson Lau; David Wayne; Spencer Lewis; Özlem Uzuner; Martin L. Gunn; Meliha Yetisgen (AMIA, 2021)

MNLP at MEDIQA 2021: Fine-Tuning PEGASUS for Consumer Health Question Summarization. - Jooyeon Lee; Huong Dang; Özlem Uzuner; Sam Henry 001 (BioNLP@NAACL-HLT, 2021)

Detecting Scarce Emotions Using BERT and Hyperparameter Optimization. - Zahra Rajabi; Özlem Uzuner; Amarda Shehu (ICANN (5), 2021)

Evaluating the Relevance of UMLS Knowledge Base for Public Health Informatics during Disasters. - Yasas Senarath; Jennifer L. Chan; Hemant Purohit; Özlem Uzuner (ISCRAM, 2021)

Scalable Graph Synthesis with Adj and 1 - Adj. - Jinsung Jeon; Jing Liu 024; Jayoung Kim 002; Jaehoon Lee 002; Noseong Park; Jamie Jooyeon Lee; Özlem Uzuner; Sushil Jajodia (SDM, 2021)

SemEval-2021 Task 10: Source-Free Domain Adaptation for Semantic Processing. - Egoitz Laparra; Xin Su 008; Yiyun Zhao; Özlem Uzuner; Timothy A. Miller; Steven Bethard (SemEval@ACL/IJCNLP, 2021)

BERT Model for Fake News Detection Based on Social Bot Activities in the COVID-19 Pandemic. - Maryam Heidari; Samira Zad; Parisa Hajibabaee; Masoud Malekzadeh; SeyyedPooya HekmatiAthar; Özlem Uzuner; James H. Jones (UEMCON, 2021)

Review of Graph Neural Network in Text Classification. - Masoud Malekzadeh; Parisa Hajibabaee; Maryam Heidari; Samira Zad; Özlem Uzuner; James H. Jones (UEMCON, 2021)

Leveraging Offensive Language for Sarcasm and Sentiment Detection in Arabic. - Fatemah Husain; Özlem Uzuner (WANLP, 2021)

Exploratory Arabic Offensive Language Dataset Analysis. - Fatemah Husain; Özlem Uzuner (CoRR, 2021)

Transfer Learning Approach for Arabic Offensive Language Detection System - BERT-Based Model. - Fatemah Husain; Özlem Uzuner (CoRR, 2021)

Transferability of Neural Network-based De-identification Systems. - Kahyun Lee; Nicholas J. Dobbins; Bridget T. McInnes; Meliha Yetisgen; Özlem Uzuner (CoRR, 2021)

Performance of Automatic De-identification Across Different Note Types. - Nicholas J. Dobbins; David Wayne; Kahyun Lee; Özlem Uzuner; Meliha Yetisgen (CoRR, 2021)

Extracting Radiological Findings With Normalized Anatomical Information Using a Span-Based BERT Relation Extraction Model. - Kevin Lybarger; Aashka Damani; Martin L. Gunn; Özlem Uzuner; Meliha Yetisgen (CoRR, 2021)

Corrigendum to: The 2019 National Natural language processing (NLP) Clinical Challenges (n2c2)/Open Health NLP (OHNLP) shared task on clinical concept normalization for clinical records. - Sam Henry 001; Yanshan Wang; Feichen Shen; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2021)

Transferability of neural network clinical deidentification systems. - Kahyun Lee; Nicholas J. Dobbins; Bridget T. McInnes; Meliha Yetisgen; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2021)

MT-clinical BERT: scaling clinical information extraction with multitask learning. - Andriy Mulyar; Özlem Uzuner; Bridget T. McInnes (J. Am. Medical Informatics Assoc., 2021)

Fake Document Generation for Cyber Deception by Manipulating Text Comprehensibility. - Prakruthi Karuna; Hemant Purohit; Sushil Jajodia; Rajesh Ganesan; Özlem Uzuner (IEEE Syst. J., 2021)

A Survey of Offensive Language Detection for the Arabic Language. - Fatemah Husain; Özlem Uzuner (ACM Trans. Asian Low Resour. Lang. Inf. Process., 2021)

A Corpus of Radiology Reports From Multiple Imaging Modalities With Fine-grained Event-based Annotations. - Kevin Lybarger; Namu Park; Sitong Zhou; Aashka Damani; Alison Brennan; Jagjeet Gill; Nianiella Dorvall; Vy Huynh; Spencer Lewis; Martin L. Gunn; Özlem Uzuner; Meliha Yetisgen (AMIA, 2022)

Transfer Learning Across Arabic Dialects for Offensive Language Detection. - Fatemah Husain; Özlem Uzuner (IALP, 2022)

Challenges and opportunities for mining adverse drug reactions: perspectives from pharma, regulatory agencies, healthcare providers and consumers. - Graciela Gonzalez-Hernandez; Martin Krallinger; Monica A. Muñoz; Raul Rodriguez-Esteban; Özlem Uzuner; Lynette Hirschman (Database J. Biol. Databases Curation, 2022)

Fine-Tuning Approach for Arabic Offensive Language Detection System: BERT-Based Model. - Fatemah Husain; Özlem Uzuner (CoRR, 2022)

Online User Profiling to Detect Social Bots on Twitter. - Maryam Heidari; James H. Jones Jr.; Özlem Uzuner (CoRR, 2022)

The Leaf Clinical Trials Corpus: a new resource for query generation from clinical trial eligibility criteria. - Nicholas J. Dobbins; Tony Mullen; Özlem Uzuner; Meliha Yetisgen (CoRR, 2022)

A Context-Enhanced De-identification System. - Kahyun Lee; Mehmet Kayaalp 002; Sam Henry 001; Özlem Uzuner (ACM Trans. Comput. Heal., 2022)

A scoping review of publicly available language tasks in clinical natural language processing. - Yanjun Gao; Dmitriy Dligach; Leslie Christensen; Samuel Tesch; Ryan Laffin; Dongfang Xu; Timothy Miller 002; Özlem Uzuner; Matthew M. Churpek; Majid Afshar (J. Am. Medical Informatics Assoc., 2022)

Call for papers: Special issue on clinical natural language processing for secondary use applications. - Meliha Yetisgen; Özlem Uzuner; Yanjun Gao; Diwakar Mahajan (J. Biomed. Informatics, 2022)

Investigating the Effect of Preprocessing Arabic Text on Offensive Language and Hate Speech Detection. - Fatemah Husain; Özlem Uzuner (ACM Trans. Asian Low Resour. Lang. Inf. Process., 2022)

Prompt-based Extraction of Social Determinants of Health Using Few-shot Learning. - Giridhar Kaushik Ramachandran; Yujuan Fu; Bin Han; Kevin Lybarger; Nicholas J. Dobbins; Özlem Uzuner; Meliha Yetisgen (ClinicalNLP@ACL, 2023)

MASON-NLP at eRisk 2023: Deep Learning-Based Detection of Depression Symptoms from Social Media Texts. - Fardin Ahsan Sakib; Ahnaf Atef Choudhury; Özlem Uzuner (CLEF (Working Notes), 2023)

MasonNLP+ at SemEval-2023 Task 8: Extracting Medical Questions, Experiences and Claims from Social Media using Knowledge-Augmented Pre-trained Language Models. - Giridhar Kaushik Ramachandran; Haritha Gangavarapu; Kevin Lybarger; Özlem Uzuner (SemEval@ACL, 2023)

Extracting medication changes in clinical narratives using pre-trained language models. - Giridhar Kaushik Ramachandran; Kevin Lybarger; Yaya Liu; Diwakar Mahajan; Jennifer J. Liang; Ching-Huei Tsou; Meliha Yetisgen; Özlem Uzuner (J. Biomed. Informatics, 2023)

Progress Note Understanding - Assessment and Plan Reasoning: Overview of the 2022 N2C2 Track 3 shared task. - Yanjun Gao; Dmitriy Dligach; Timothy Miller 002; Matthew M. Churpek; Özlem Uzuner; Majid Afshar (J. Biomed. Informatics, 2023)

Leveraging natural language processing to augment structured social determinants of health data in the electronic health record. - Kevin Lybarger; Nicholas J. Dobbins; Ritche Long; Angad P. Singh; Patrick Wedgeworth; Özlem Uzuner; Meliha Yetisgen (J. Am. Medical Informatics Assoc., 2023)

Advancements in extracting social determinants of health information from narrative text. - Kevin Lybarger; Oliver J. Bear Don't Walk IV; Meliha Yetisgen; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2023)

The 2022 n2c2/UW shared task on extracting social determinants of health. - Kevin Lybarger; Meliha Yetisgen; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2023)

Overview of the 2022 n2c2 shared task on contextualized medication event extraction in clinical notes. - Diwakar Mahajan; Jennifer J. Liang; Ching-Huei Tsou; Özlem Uzuner (J. Biomed. Informatics, 2023)

LeafAI: query generator for clinical cohort discovery rivaling a human programmer. - Nicholas J. Dobbins; Bin Han; Weipeng Zhou; Kristine Lan; H. Nina Kim; Robert D. Harrington; Özlem Uzuner; Meliha Yetisgen (J. Am. Medical Informatics Assoc., 2023)

Extracting Social Determinants of Health from Pediatric Patient Notes Using Large Language Models: Novel Corpus and Methods. - Yujuan Fu; Giridhar Kaushik Ramachandran; Nicholas J. Dobbins; Namu Park; Michael Leu; Abby R. Rosenberg; Kevin Lybarger; Fei Xia 004; Özlem Uzuner; Meliha Yetisgen (LREC/COLING, 2024)

A Novel Corpus of Annotated Medical Imaging Reports and Information Extraction Results Using BERT-based Language Models. - Namu Park; Kevin Lybarger; Giridhar Kaushik Ramachandran; Spencer Lewis; Aashka Damani; Özlem Uzuner; Martin L. Gunn; Meliha Yetisgen (LREC/COLING, 2024)

MasonTigers at SemEval-2024 Task 8: Performance Analysis of Transformer-based Models on Machine-Generated Text Detection. - Sadiya Sayara Chowdhury Puspo; Md. Nishat Raihan; Dhiman Goswami; Al Nahian Bin Emran; Amrita Ganguly; Özlem Uzuner (SemEval@NAACL, 2024)

Collaborative Design for Job-Seekers with Autism: A Conceptual Framework for Future Research. - Sungsoo Ray Hong; Marcos Zampieri; Brittany N. Hand; Vivian Motti 001; Dongjun Chung; Özlem Uzuner (CoRR, 2024)

BioMistral-NLU: Towards More Generalizable Medical Language Understanding through Instruction Tuning. - Yujuan Fu; Giridhar Kaushik Ramachandran; Namu Park; Kevin Lybarger; Fei Xia 004; Özlem Uzuner; Meliha Yetisgen (CoRR, 2024)

CACER: Clinical concept Annotations for Cancer Events and Relations. - Yujuan Fu; Giridhar Kaushik Ramachandran; Ahmad Halwani; Bridget T. McInnes; Fei Xia 004; Kevin Lybarger; Meliha Yetisgen; Özlem Uzuner (J. Am. Medical Informatics Assoc., 2024)

Large language models for biomedicine: foundations, opportunities, challenges, and best practices. - Satya S. Sahoo; Joseph M. Plasek; Hua Xu 001; Özlem Uzuner; Trevor Cohen; Meliha Yetisgen; Hongfang Liu; Stéphane M. Meystre; Yanshan Wang (J. Am. Medical Informatics Assoc., 2024)

Clinical natural language processing for secondary uses. - Yanjun Gao; Diwakar Mahajan; Özlem Uzuner; Meliha Yetisgen (J. Biomed. Informatics, 2024)

Leveraging Machine-Generated Data for Joint Intent Detection and Slot Filling in Bangla: A Resource-Efficient Approach. - A. H. M. Rezaul Karim; Özlem Uzuner (COLING Workshops, 2025)

Does Data Contamination Detection Work (Well) for LLMs? A Survey and Evaluation on Detection Assumptions. - Yujuan Fu; Özlem Uzuner; Meliha Yetisgen; Fei Xia 004 (NAACL (Findings), 2025)

A scoping review of natural language processing in addressing medically inaccurate information: Errors, misinformation, and hallucination. - Zhaoyi Sun; Wen-wai Yim; Özlem Uzuner; Fei Xia 004; Meliha Yetisgen (J. Biomed. Informatics, 2025)

Adapting Biomedical Abstracts into Plain language using Large Language Models. - Haritha Gangavarapu; Giridhar Kaushik Ramachandran; Kevin Lybarger; Meliha Yetisgen; Özlem Uzuner (CoRR, 2025)

Spurious Correlations and Beyond: Understanding and Mitigating Shortcut Learning in SDOH Extraction with Large Language Models. - Fardin Ahsan Sakib; Ziwei Zhu; Karen Trister Grace; Meliha Yetisgen; Özlem Uzuner (CoRR, 2025)

Prompting Large Language Models to Detect Dementia Family Caregivers. - Md Badsha Biswas; Özlem Uzuner (CoRR, 2025)