Manifold learning and maximum likelihood estimation for hyperbolic network embedding. - Gregorio Alanis-Lobato; Pablo Mier; Miguel A. Andrade-Navarro (Appl. Netw. Sci., 2016)

FastaHerder2: Four Ways to Research Protein Function and Evolution with Clustering and Clustered Databases. - Pablo Mier; Miguel A. Andrade-Navarro (J. Comput. Biol., 2016)

dAPE: a web server to detect homorepeats and follow their evolution. - Pablo Mier; Miguel A. Andrade-Navarro (Bioinform., 2017)

The latent geometry of the human protein interaction network. - Gregorio Alanis-Lobato; Pablo Mier; Miguel A. Andrade-Navarro (Bioinform., 2018)

Automated selection of homologs to track the evolutionary history of proteins. - Pablo Mier; Antonio J. Pérez-Pulido; Miguel A. Andrade-Navarro (BMC Bioinform., 2018)

Toward completion of the Earth's proteome: an update a decade later. - Pablo Mier; Miguel A. Andrade-Navarro (Briefings Bioinform., 2019)

Traitpedia: a collaborative effort to gather species traits. - Pablo Mier; Miguel A. Andrade-Navarro (Bioinform., 2019)

Disentangling the complexity of low complexity proteins. - Pablo Mier; Lisanna Paladin; Stella Tamana; Sophia Petrosian; Borbála Hajdu-Soltész; Annika Urbanek; Aleksandra Gruca; Dariusz Plewczynski; Marcin Grynberg; Pau Bernadó; Zoltán Gáspári; Christos A. Ouzounis; et al. (Briefings Bioinform., 2020)

CRISPR sequences are sometimes erroneously translated and can contaminate public databases with spurious proteins containing spaced repeats. - Alejandro Rubio; Pablo Mier; Miguel A. Andrade-Navarro; Andrés Garzón; Juan Jiménez; Antonio J. Pérez-Pulido (Database J. Biol. Databases Curation, 2020)

PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins. - Patryk Jarnot; Joanna Ziemska-Legiecka; Laszlo Dobson; Matthew Merski; Pablo Mier; Miguel A. Andrade-Navarro; John M. Hancock; Zsuzsanna Dosztányi; Lisanna Paladin; Marco Necci; Damiano Piovesan; Silvio C. E. Tosatto; et al. (Nucleic Acids Res., 2020)

The sequence context in poly-alanine regions: structure, function and conservation. - Pablo Mier; Carlos A. Elena-Real; Juan Cortés; Pau Bernadó; Miguel A. Andrade-Navarro (Bioinform., 2022)