Sparse Logistic Classifiers for Interpretable Protien Homology Detection. - Pai-Hsi Huang; Vladimir Pavlovic 001 (ICDM Workshops, 2006)

On the Role of Local Matching for Efficient Semi-supervised Protein Sequence Classification. - Pavel P. Kuksa; Pai-Hsi Huang; Vladimir Pavlovic 001 (BIBM, 2008)

Fast protein homology and fold detection with sparse spatial sample kernels. - Pavel P. Kuksa; Pai-Hsi Huang; Vladimir Pavlovic 001 (ICPR, 2008)

Scalable Algorithms for String Kernels with Inexact Matching. - Pavel P. Kuksa; Pai-Hsi Huang; Vladimir Pavlovic 001 (NIPS, 2008)

Protein homology detection with biologically inspired features and interpretable statistical models. - Pai-Hsi Huang; Vladimir Pavlovic 001 (Int. J. Data Min. Bioinform., 2008)

Efficient use of unlabeled data for protein sequence classification: a comparative study. - Pavel P. Kuksa; Pai-Hsi Huang; Vladimir Pavlovic 001 (BMC Bioinform., 2009)