Entourage: all-in-one sequence analysis software for genome assembly, virus detection, virus discovery, and intrasample variation profiling. - Worakorn Phumiphanjarphak; Pakorn Aiewsakun (BMC Bioinform., 2024)

Caged Markov process - A continuous-time framework for modeling a constrained Markov process within a freely-evolving Markov process. - Tanes Printechapat; Pakorn Aiewsakun; Tipaluck Krityakierne (Math. Comput. Simul., 2025)