Dynamic Probabilistic Networks for Modelling and Identifying Dynamic Systems: a MCMC Approach. - Riccardo Bellazzi; Paolo Magni; Giuseppe De Nicolao (Intell. Data Anal., 1997)

Mining biomedical time series by combining structural analysis and temporal abstractions. - Riccardo Bellazzi; Paolo Magni; Cristiana Larizza; Giuseppe De Nicolao; Alberto Riva; Mario Stefanelli (AMIA, 1998)

A new approach to optimal dynamic therapy planning. - Paolo Magni (AMIA, 1998)

Using uncertainty management techniques in medical therapy planning: A decision-theoretic approach. - Paolo Magni; Riccardo Bellazzi; Franco Locatelli (Applications of Uncertainty Formalisms, 1998)

Bayesian Function Learning Using MCMC Methods. - Paolo Magni; Riccardo Bellazzi; Giuseppe De Nicolao (IEEE Trans. Pattern Anal. Mach. Intell., 1998)

Intelligent Analysis of Clinical Time Series by Combining Structural Filtering and Temporal Abstractions. - Riccardo Bellazzi; Cristiana Larizza; Paolo Magni; Stefania Montani; Giuseppe De Nicolao (AIMDM, 1999)

Intelligent analysis of clinical time series: an application in the diabetes mellitus domain. - Riccardo Bellazzi; Cristiana Larizza; Paolo Magni; Stefania Montani; Mario Stefanelli (Artif. Intell. Medicine, 2000)

Deciding when to intervene: a Markov decision process approach. - Paolo Magni; Silvana Quaglini; Monia Marchetti; Giovanni Barosi (Int. J. Medical Informatics, 2000)

Bayesian analysis of blood glucose time series from diabetes home monitoring. - Riccardo Bellazzi; Paolo Magni; Giuseppe De Nicolao (IEEE Trans. Biomed. Eng., 2000)

Integrating Different Methodologies for Insulin Therapy Support in Type 1 Diabetic Patients. - Stefania Montani; Paolo Magni; Abdul V. Roudsari; Ewart R. Carson; Riccardo Bellazzi (AIME, 2001)

Improving Dialysis Services through Information Technology: From Telemedicine to Data Mining. - Riccardo Bellazzi; Paolo Magni; Roberto Bellazzi (MedInfo, 2001)

A stabilizing model-based predictive control algorithm for nonlinear systems. - Paolo Magni; Giuseppe De Nicolao; Lorenza Magnani; Riccardo Scattolini (Autom., 2001)

Output feedback and tracking of nonlinear systems with model predictive control. - Paolo Magni; Giuseppe De Nicolao; Riccardo Scattolini (Autom., 2001)

Quality Assessment of Hemodialysis Services through Temporal Data Mining. - Riccardo Bellazzi; Cristiana Larizza; Paolo Magni; Roberto Bellazzi (AIME, 2003)

Integrating model-based decision support in a multi-modal reasoning system for managing type 1 diabetic patients. - Stefania Montani; Paolo Magni; Riccardo Bellazzi; Cristiana Larizza; Abdul V. Roudsari; Ewart R. Carson (Artif. Intell. Medicine, 2003)

Clustering gene expression data with Temporal Abstractions. - Lucia Sacchi; Riccardo Bellazzi; Cristiana Larizza; Paolo Magni; Tomaz Curk; Uros Petrovic; Blaz Zupan (MedInfo, 2004)

Learning Rules with Complex Temporal Patterns in Biomedical Domains. - Lucia Sacchi; Riccardo Bellazzi; Cristiana Larizza; Riccardo Porreca; Paolo Magni (AIME, 2005)

Precedence Temporal Networks from Gene Expression Data. - Lucia Sacchi; Riccardo Bellazzi; Riccardo Porreca; Cristiana Larizza; Paolo Magni (CBMS, 2005)

Temporal data mining for the quality assessment of hemodialysis services. - Riccardo Bellazzi; Cristiana Larizza; Paolo Magni; Roberto Bellazzi (Artif. Intell. Medicine, 2005)

TA-clustering: Cluster analysis of gene expression profiles through Temporal Abstractions. - Lucia Sacchi; Riccardo Bellazzi; Cristiana Larizza; Paolo Magni; Tomaz Curk; Uros Petrovic; Blaz Zupan (Int. J. Medical Informatics, 2005)

A New Approach for the Analysis of Mass Spectrometry Data for Biomarker Discovery. - Nicola Barbarini; Paolo Magni; Riccardo Bellazzi (AMIA, 2006)

Inferring gene expression networks via static and dynamic data integration. - Fulvia Ferrazzi; Paolo Magni; Lucia Sacchi; Riccardo Bellazzi (MIE, 2006)

A hierarchical Naïve Bayes Model for handling sample heterogeneity in classification problems: an application to tissue microarrays. - Francesca Demichelis; Paolo Magni; Paolo Piergiorgi; Mark A. Rubin; Riccardo Bellazzi (BMC Bioinform., 2006)

A stochastic model to assess the variability of blood glucose time series in diabetic patients self-monitoring. - Paolo Magni; Riccardo Bellazzi (IEEE Trans. Biomed. Eng., 2006)

A procedure to decompose high resolution mass spectra. - Nicola Barbarini; Paolo Magni; Riccardo Bellazzi (BMC Bioinform., 2007)

Inferring gene regulatory networks by integrating static and dynamic data. - Fulvia Ferrazzi; Paolo Magni; Lucia Sacchi; Angelo Nuzzo; Uros Petrovic; Riccardo Bellazzi (Int. J. Medical Informatics, 2007)

Precedence Temporal Networks to represent temporal relationships in gene expression data. - Lucia Sacchi; Cristiana Larizza; Paolo Magni; Riccardo Bellazzi (J. Biomed. Informatics, 2007)

TimeClust: a clustering tool for gene expression time series. - Paolo Magni; Fulvia Ferrazzi; Lucia Sacchi; Riccardo Bellazzi (Bioinform., 2008)

A Minimal Model of Tumor Growth Inhibition. - Paolo Magni; Massimiliano Germani; Giuseppe De Nicolao; Giulia Bianchini; Monica Simeoni; Italo Poggesi; Maurizio Rocchetti (IEEE Trans. Biomed. Eng., 2008)

A Perl procedure for protein identification by Peptide Mass Fingerprinting. - Alessandra Tiengo; Nicola Barbarini; Sonia Troiani; Luisa Rusconi; Paolo Magni (BMC Bioinform., 2009)

Accurate peak list extraction from proteomic mass spectra for identification and profiling studies. - Nicola Barbarini; Paolo Magni (BMC Bioinform., 2010)

Summarizing Probe Intensities of Affymetrix GeneChip 3' Expression Arrays Taking into Account Day-to-Day Variability. - Paolo Magni; Angela Simeone; Sandra Healy; Antonella Isacchi; Roberta Bosotti (IEEE ACM Trans. Comput. Biol. Bioinform., 2011)

Characterization of an inducible promoter in different DNA copy number conditions. - Susanna Zucca; Lorenzo Pasotti; Giuliano Mazzini; Maria Gabriella Cusella De Angelis; Paolo Magni (BMC Bioinform., 2012)

TGI-Simulator: A visual tool to support the preclinical phase of the drug discovery process by assessing in silico the effect of an anticancer drug. - Nadia Terranova; Paolo Magni (Comput. Methods Programs Biomed., 2012)

A Minimal Model of Tumor Growth Inhibition in Combination Regimens Under the Hypothesis of No Interaction Between Drugs. - Paolo Magni; Nadia Terranova; Francesca Del Bene; Massimiliano Germani; Giuseppe De Nicolao (IEEE Trans. Biomed. Eng., 2012)

Methods for genetic optimization of biocatalysts for biofuel production from dairy waste through synthetic biology. - Lorenzo Pasotti; Susanna Zucca; Michela Casanova; Nicolò Politi; Ilaria Massaiu; Giuliano Mazzini; Giuseppina Micoli; Cinzia Calvio; Maria Gabriella Cusella De Angelis; Paolo Magni (EMBC, 2015)

PhosphoHunter: An Efficient Software Tool for Phosphopeptide Identification. - Alessandra Tiengo; Lorenzo Pasotti; Nicola Barbarini; Paolo Magni (Adv. Bioinformatics, 2015)

Modelling the effects of cell-to-cell variability on the output of interconnected gene networks in bacterial populations. - Nicolò Politi; Lorenzo Pasotti; Susanna Zucca; Paolo Magni (BMC Syst. Biol., 2015)

Analysis of amplicon-based NGS data from neurological disease gene panels: a new method for allele drop-out management. - Susanna Zucca; Margherita Villaraggia; Stella Gagliardi; Gaetano Salvatore Grieco; Marialuisa Valente; Cristina Cereda; Paolo Magni (BMC Bioinform., 2016)

A Synthetic Close-Loop Controller Circuit for the Regulation of an Extracellular Molecule by Engineered Bacteria. - Lorenzo Pasotti; Massimo Bellato; Nicolò Politi; Michela Casanova; Susanna Zucca; Maria Gabriella Cusella De Angelis; Paolo Magni (IEEE Trans. Biomed. Circuits Syst., 2019)

mvLognCorrEst: an R package for sampling from multivariate lognormal distributions and estimating correlations from uncomplete correlation matrix. - Alessandro De Carlo; Elena Maria Tosca; Nicola Melillo; Paolo Magni (Comput. Methods Programs Biomed., 2023)

AI Models Predicting Methylation Status from DNA Sequence: What is Missing? - Andrei Stefan Blindu; Silvia Berardelli; Federica De Paoli; Rossella Tricarico; Susanna Zucca; Paolo Magni (AIME (2), 2025)