An efficient point based registration of intra-operative ultrasound images with MR images for computation of brain shift; A phantom study. - Parastoo Farnia; Alireza Ahmadian; Alireza Khoshnevisan; AmirHossein Jaberzadeh; Nasim Dadashi Serej; Anahita Fathi Kazerooni (EMBC, 2011)

Segmentation of brain tumors in MRI images using multi-scale gradient vector flow. - Anahita Fathi Kazerooni; Alireza Ahmadian; Nasim Dadashi Serej; Hamidreza Saligheh Rad; Hooshang Saberi; Hossein Yousefi; Parastoo Farnia (EMBC, 2011)

On the performance of improved ICP algorithms for registration of intra-ultrasound with pre-MR images; a phantom study. - Parastoo Farnia; Alireza Ahmadian; Mahdi Sedighpoor; Alireza Khoshnevisan; Meysam Siyah Mansoory (EMBC, 2012)

Mitral Valve Prolapse detection using landmark extraction from echocardiography sequences. - Meysam Siyah Mansoory; Alireza Ahmadian; Amrollah Gorgian Mohammadi; Parastoo Farnia (EMBC, 2012)

An efficient method for estimating soft tissue deformation based on intraoperative stereo image features and point-based registration. - Alireza Ahmadian; Nasim Dadashi Serej; Saeed Karimifard; Parastoo Farnia (Int. J. Imaging Syst. Technol., 2013)

A shape based rotation invariant method for ultrasound-MR image registration: A phantom study. - Mostafa Abdolghaffar; Alireza Ahmadian; N. Ayoobi; Parastoo Farnia; Touraj Shabanian; Naser Shafiei; Javad Alirezaie (EMBC, 2014)

A hybrid method for non-rigid registration of intra-operative ultrasound images with pre-operative MR images. - Parastoo Farnia; Alireza Ahmadian; Touraj Shabanian; Nasim Dadashi Serej; Javad Alirezaie (EMBC, 2014)

Brain-shift compensation by non-rigid registration of intra-operative ultrasound images with preoperative MR images based on residual complexity. - Parastoo Farnia; Alireza Ahmadian; Touraj Shabanian; Nasim Dadashi Serej; Javad Alirezaie (Int. J. Comput. Assist. Radiol. Surg., 2015)

Curvelet based residual complexity objective function for non-rigid registration of pre-operative MRI with intra-operative ultrasound images. - Parastoo Farnia; Bahador Makkiabadi; Alireza Ahmadian; Javad Alirezaie (EMBC, 2016)

A robust keypoint extraction and matching algorithm based on wavelet transform and information theory for point-based registration in endoscopic sinus cavity data. - Nasim Dadashi Serej; Alireza Ahmadian; Shohreh Kasaei; Seyed Musa Sadrehosseini; Parastoo Farnia (Signal Image Video Process., 2016)

Segmentation of GBM in MRI images using an efficient speed function based on level set method. - Alireza Mojtabavi; Parastoo Farnia; Alireza Ahmadian; Meysam Alimohamadi; Ahmad Pourrashidi; Hamidreza Saligheh Rad; Javad Alirezaie (CISP-BMEI, 2017)

Co-Sparse Analysis Model Based Image Registration to Compensate Brain Shift by Using Intra-Operative Ultrasound Imaging. - Parastoo Farnia; Ebrahim Najafzadeh; Alireza Ahmadian; Bahador Makkiabadi; Meysam Alimohamadi; Javad Alirezaie (EMBC, 2018)

Evaluation of multi-wavelengths LED-based photoacoustic imaging for maximum safe resection of glioma: a proof of concept study. - Ebrahim Najafzadeh; Hossein Ghadiri; Meysam Alimohamadi; Parastoo Farnia; Mohammad Mehrmohammadi; Alireza Ahmadian (Int. J. Comput. Assist. Radiol. Surg., 2020)

Accurate Automatic Glioma Segmentation in Brain MRI images Based on CapsNet. - Maryam Jalili Aziz; Amin Amiri Tehrani Zade; Parastoo Farnia; Meysam Alimohamadi; Bahador Makkiabadi; Alireza Ahmadian; Javad Alirezaie (EMBC, 2021)

A Hybrid Capsule Network for Automatic 3D Mandible Segmentation applied in Virtual Surgical Planning. - Hadis Moghaddasi; Amin Amiri Tehrani Zade; Maryam Jalili Aziz; Alireza Parhiz; Parastoo Farnia; Alireza Ahmadian; Javad Alirezaie (EMBC, 2022)

Photoacoustic-MR Image Registration Based on a Co-Sparse Analysis Model to Compensate for Brain Shift. - Parastoo Farnia; Bahador Makkiabadi; Meysam Alimohamadi; Ebrahim Najafzadeh; Maryam Basij; Yan Yan; Mohammad Mehrmohammadi; Alireza Ahmadian (Sensors, 2022)

An Efficient Capsule-based Network for 2D Left Ventricle Segmentation in Echocardiography Images. - Reza Naghne; Ali Kazemi; Hadis Moghaddasi; Mahdiyeh Rahmani; Parastoo Farnia; Alireza Ahmadian; Javad Alirezaie (EMBC, 2023)