SwS: a solvation web service for nucleic acids. - Pascal Auffinger; Yaser Hashem (Bioinform., 2007)

Comment on "Evaluating Unexpectedly Short Non-covalent Distances in X-ray Crystal Structures of Proteins with Electronic Structure Analysis". - Holger Kruse; Jirí Sponer; Pascal Auffinger (J. Chem. Inf. Model., 2019)

Short-Range Imbalances in the AMBER Lennard-Jones Potential for (Deoxy)Ribose···Nucleobase Lone-Pair···π Contacts in Nucleic Acids. - Klaudia Mráziková; Jirí Sponer; Vojtech Mlýnský; Pascal Auffinger; Holger Kruse (J. Chem. Inf. Model., 2021)

Multiscale Modeling of Phosphate···π Contacts in RNA U-Turns Exposes Differences between Quantum-Chemical and AMBER Force Field Descriptions. - Klaudia Mráziková; Holger Kruse; Vojtech Mlýnský; Pascal Auffinger; Jirí Sponer (J. Chem. Inf. Model., 2022)