L-systems and MTGs: Integrating Simulation and Formal Analysis of Architectural Plant Models. - Pascal Ferraro; Christophe Godin; Przemyslaw Prusinkiewicz (ESM, 2002)

An Edit Distance between Quotiented Trees. - Pascal Ferraro; Christophe Godin (Algorithmica, 2003)

Optimal mappings with minimum number of connected components in tree-to-tree comparison problems. - Pascal Ferraro; Christophe Godin (J. Algorithms, 2003)

Polyphonic Music Retrieval by Local Edition of Quotiented Sequences. - Pierre Hanna; Pascal Ferraro (CBMI, 2007)

Music similarity: improvements of edit-based algorithms by considering music theory. - Matthias Robine; Pierre Hanna; Pascal Ferraro (Multimedia Information Retrieval, 2007)

Optimizations of Local Edition for Evaluating Similarity Between Monophonic Musical Sequences. - Pierre Hanna; Pascal Ferraro (RIAO, 2007)

Adaption of String Matching Algorithms for Identification of Near-Duplicate Music Documents. - Matthias Robine; Pierre Hanna; Pascal Ferraro; Julien Allali (PAN, 2007)

Local Transpositions in Alignment of Polyphonic Musical Sequences. - Julien Allali; Pascal Ferraro; Pierre Hanna; Costas S. Iliopoulos (SPIRE, 2007)

Local similarity between quotiented ordered trees. - Aïda Ouangraoua; Pascal Ferraro; Laurent Tichit; Serge Dulucq (J. Discrete Algorithms, 2007)

Visualisation of Musical Structure by Applying Improved Editing Algorithms. - Pierre Hanna; Matthias Robine; Pascal Ferraro (ICMC, 2008)

Recherche de documents musicaux par similarité mélodique. - Pierre Hanna; Pascal Ferraro; Matthias Robine; Julien Allali (Document Numérique, 2008)

Polyphonic Alignment Algorithms for Symbolic Music Retrieval. - Julien Allali; Pascal Ferraro; Pierre Hanna; Matthias Robine (CMMR/ICAD, 2009)

Structured Representation of Harmony for Music Retrieval. - Matthias Robine; Pierre Hanna; Thomas Rocher; Pascal Ferraro (ICMC, 2009)

Accelerating Query-by-Humming on GPU. - Pascal Ferraro; Pierre Hanna; Laurent Imbert; Thomas Izard (ISMIR, 2009)

Validation and Decomposition of Partially Occluded Images with Holes. - Julien Allali; Pavlos Antoniou; Costas S. Iliopoulos; Pascal Ferraro; Manal Mohamed 001 (Stringology, 2009)

Toward a General Framework for Polyphonic Comparison. - Julien Allali; Pascal Ferraro; Pierre Hanna; Costas S. Iliopoulos; Matthias Robine (Fundam. Informaticae, 2009)

A new constrained edit distance between quotiented ordered trees. - Aïda Ouangraoua; Pascal Ferraro (J. Discrete Algorithms, 2009)

A constrained edit distance algorithm between semi-ordered trees. - Aïda Ouangraoua; Pascal Ferraro (Theor. Comput. Sci., 2009)

Combinatorial Detection of Arrhythmia. - Julien Allali; Pascal Ferraro; Costas S. Iliopoulos; Spiros Michalakopoulos (BIOSIGNALS, 2010)

Quantifying the Degree of Self-Nestedness of Trees: Application to the Structural Analysis of Plants. - Christophe Godin; Pascal Ferraro (IEEE ACM Trans. Comput. Biol. Bioinform., 2010)

Exemplar-based Assignment of Large Missing Audio Parts using String Matching on Tonal Features. - Benjamin Martin 001; Pierre Hanna; Ta Vinh Thong; Myriam Desainte-Catherine; Pascal Ferraro (ISMIR, 2011)

Indexing musical pieces using their major repetition. - Benjamin Martin 001; Pierre Hanna; Matthias Robine; Pascal Ferraro (JCDL, 2011)

Towards an indexing method to speed-up music retrieval. - Benjamin Martin 001; Pierre Hanna; Matthias Robine; Pascal Ferraro (SIGIR, 2011)

BLAST for Audio Sequences Alignment: A Fast Scalable Cover Identification Tool. - Benjamin Martin 001; Daniel G. Brown 001; Pierre Hanna; Pascal Ferraro (ISMIR, 2012)

BRASERO: A Resource for Benchmarking RNA Secondary Structure Comparison Algorithms. - Julien Allali; Cédric Saule; Cédric Chauve; Yves D'Aubenton-Carafa; Alain Denise; Christine Drevet; Pascal Ferraro; Daniel Gautheret; Claire Herrbach; Fabrice Leclerc; Antoine de Monte; Aïda Ouangraoua; et al. (Adv. Bioinformatics, 2012)

Efficient chaining of seeds in ordered trees. - Julien Allali; Cédric Chauve; Pascal Ferraro; Anne-Laure Gaillard (J. Discrete Algorithms, 2012)