Widespread position-specific conservation of synonymous rare codons within coding sequences. - Julie L. Chaney; Aaron Steele; Rory Carmichael; Anabel Rodriguez; Alicia T. Specht; Kim Ngo; Jun Li 052; Scott J. Emrich; Patricia L. Clark (PLoS Comput. Biol., 2017)

HarMinMax: Harmonizing Codon Usage to Replicate Local Host Translation. - Gabriel Wright; Anabel Rodriguez; Patricia L. Clark; Scott J. Emrich (BCB, 2018)

Network analysis of synonymous codon usage. - Khalique Newaz; Gabriel Wright; Jacob Piland; Jun Li 052; Patricia L. Clark; Scott J. Emrich; Tijana Milenkovic (Bioinform., 2020)