Pharmacophore modeling and parallel screening for PPAR ligands. - Patrick Markt; Daniela Schuster 001; Johannes Kirchmair; Christian Laggner; Thierry Langer (J. Comput. Aided Mol. Des., 2007)

Fast and Efficient in Silico 3D Screening: Toward Maximum Computational Efficiency of Pharmacophore-Based and Shape-Based Approaches. - Johannes Kirchmair; Stojanka Ristic; Kathrin Eder; Patrick Markt; Gerhard Wolber; Christian Laggner; Thierry Langer (J. Chem. Inf. Model., 2007)

Evaluation of the performance of 3D virtual screening protocols: RMSD comparisons, enrichment assessments, and decoy selection - What can we learn from earlier mistakes? - Johannes Kirchmair; Patrick Markt; Simona Distinto; Gerhard Wolber; Thierry Langer (J. Comput. Aided Mol. Des., 2008)

Discovery of Novel Cathepsin S Inhibitors by Pharmacophore-Based Virtual High-Throughput Screening. - Patrick Markt; Caroline McGoohan; Brian Walker; Johannes Kirchmair; Clemens Feldmann; Gabriella De Martino; Gudrun M. Spitzer; Simona Distinto; Daniela Schuster 001; Gerhard Wolber; Christian Laggner; Thierry Langer (J. Chem. Inf. Model., 2008)

How To Optimize Shape-Based Virtual Screening: Choosing the Right Query and Including Chemical Information. - Johannes Kirchmair; Simona Distinto; Patrick Markt; Daniela Schuster 001; Gudrun M. Spitzer; Klaus R. Liedl; Gerhard Wolber (J. Chem. Inf. Model., 2009)

Hydrogen-Bonding Patterns of Minor Groove-Binder-DNA Complexes Reveal Criteria for Discovery of New Scaffolds. - Gudrun M. Spitzer; Bernd Wellenzohn; Patrick Markt; Johannes Kirchmair; Thierry Langer; Klaus R. Liedl (J. Chem. Inf. Model., 2009)

Critical Comparison of Virtual Screening Methods against the MUV Data Set. - Pekka Tiikkainen; Patrick Markt; Gerhard Wolber; Johannes Kirchmair; Simona Distinto; Antti Poso; Olli-P. Kallioniemi (J. Chem. Inf. Model., 2009)

One Concept, Three Implementations of 3D Pharmacophore-Based Virtual Screening: Distinct Coverage of Chemical Search Space. - Gudrun M. Spitzer; Mathias Heiss; Martina Mangold; Patrick Markt; Johannes Kirchmair; Gerhard Wolber; Klaus R. Liedl (J. Chem. Inf. Model., 2010)

CLOUD - CeMM library of unique drugs. - Patrick Markt; Gerhard Dürnberger; Jacques Colinge; Stefan Kubicek (J. Cheminformatics, 2012)