The Design and Implementation of O2, an Object-Oriented Database Systems. - François Bancilhon; Gilles Barbedette; Véronique Benzaken; Claude Delobel; Sophie Gamerman; Christophe Lécluse; Patrick Pfeffer; Philippe Richard; Fernando Vélez (OODBS, 1988)

OOPE, the O2 programming environment. - Patrick Borras; Anne Doucet; Patrick Pfeffer; Didier Tallot (BDA, 1990)

Using a Database System to Implement a Debugger. - Anne Doucet; Patrick Pfeffer (DS-4, 1990)

Object Integrity Using Rules. - Claudia Bauzer Medeiros; Patrick Pfeffer (ECOOP, 1991)

Database Programmers are Handcrafters: They Need Appropriate Tools. - Anne Doucet; Gip Altair; Patrick Pfeffer (TOOLS (5), 1991)

The O2 Programming Environment. - Patrick Borras; Anne Doucet; Patrick Pfeffer; Didier Tallot (Building an Object-Oriented Database System, The Story of O2, 1992)

Using a Database System to Implement a Debugger. - Anne Doucet; Patrick Pfeffer (Building an Object-Oriented Database System, The Story of O2, 1992)

A Fully Integrated Programming Environment for an Object-Oriented Database. - Patrick Borras; Anne Doucet; Patrick Pfeffer (CAiSE, 1992)

DrugScoreRNAKnowledge-Based Scoring Function To Predict RNA-Ligand Interactions. - Patrick Pfeffer; Holger Gohlke (J. Chem. Inf. Model., 2007)

GARLig: A Fully Automated Tool for Subset Selection of Large Fragment Spaces via a Self-Adaptive Genetic Algorithm. - Patrick Pfeffer; Thomas Fober; Eyke Hüllermeier; Gerhard Klebe (J. Chem. Inf. Model., 2010)