The Deuterator: software for the determination of backbone amide deuterium levels from H/D exchange MS data. - Bruce D. Pascal; Michael J. Chalmers; Scott A. Busby; C. C. Mader; Mark R. Southern; N. F. Tsinoremas; Patrick R. Griffin (BMC Bioinform., 2007)

A Java API for working with PubChem datasets. - Mark R. Southern; Patrick R. Griffin (Bioinform., 2011)

PubChem promiscuity: a web resource for gathering compound promiscuity data from PubChem. - Stephanie A. Canny; Yasel Cruz; Mark R. Southern; Patrick R. Griffin (Bioinform., 2012)