Model-based Traction Force Microscopy Reveals Differential Tension in Cellular Actin Bundles. - Jérôme R. D. Soiné; Christoph A. Brand; Jonathan Stricker; Patrick W. Oakes; Margaret L. Gardel; Ulrich S. Schwarz (PLoS Comput. Biol., 2015)

Multiscale model of integrin adhesion assembly. - Tamara Carla Bidone; Austin V. Skeeters; Patrick W. Oakes; Gregory A. Voth (PLoS Comput. Biol., 2019)

A Workflow for Rapid Unbiased Quantification of Fibrillar Feature Alignment in Biological Images. - Stefania Marcotti; Deandra Belo de Freitas; Lee D. Troughton; Fiona N. Kenny; Tanya J. Shaw; Brian Stramer; Patrick W. Oakes (Frontiers Comput. Sci., 2021)

Zyxin is all you need: machine learning adherent cell mechanics. - Matthew S. Schmitt; Jonathan Colen; Stefano Sala; John Devany; Shailaja Seetharaman; Margaret L. Gardel; Patrick W. Oakes; Vincenzo Vitelli (CoRR, 2023)