OikoBase: a genomics and developmental transcriptomics resource for the urochordate Oikopleura dioica. - Gemma B. Danks; Coen Campsteijn; Mrutyunjaya Parida; Stephen Butcher; Harsha Doddapaneni; Bolei Fu; Raul Petrin; Raghu Metpally; Boris Lenhard; Patrick Wincker; Daniel Chourrout; Eric M. Thompson; et al. (Nucleic Acids Res., 2013)

TE-Tracker: systematic identification of transposition events through whole-genome resequencing. - Arthur Gilly; Mathilde Etcheverry; Mohammed-Amin Madoui; Julie Guy; Leandro Quadrana; Adriana Alberti; Antoine Martin; Tony Heitkam; Stefan Engelen; Karine Labadie; Jeremie Le Pen; Patrick Wincker; et al. (BMC Bioinform., 2014)

BIOCOM-PIPE: a new user-friendly metabarcoding pipeline for the characterization of microbial diversity from 16S, 18S and 23S rRNA gene amplicons. - Christophe Djemiel; Samuel Dequiedt; Battle Karimi; Aurélien Cottin; Thibault Girier; Yassin El Djoudi; Patrick Wincker; Mélanie Lelièvre; Samuel Mondy; Nicolas Chemidlin Prévost-Bouré; Pierre-Alain Maron; Lionel Ranjard; et al. (BMC Bioinform., 2020)

Cyanorak v2.1: a scalable information system dedicated to the visualization and expert curation of marine and brackish picocyanobacteria genomes. - Laurence Garczarek; Ulysse Guyet; Hugo Doré; Gregory K. Farrant; Mark Hoebeke; Loraine Brillet-Guéguen; Antoine Bisch; Mathilde Ferrieux; Jukka Siltanen; Erwan Le Corre; Gildas Le Corguillé; Morgane Ratin; et al. (Nucleic Acids Res., 2021)

The Ocean Gene Atlas v2.0: online exploration of the biogeography and phylogeny of plankton genes. - Caroline Vernette; Julien Lecubin; Pablo Sánchez; Silvia G. Acinas; Marcel Babin; Peer Bork; Emmanuel Boss; Chris Bowler; Guy Cochrane; Colomban de Vargas; Gabriel Gorsky; Lionel Guidi; et al. (Nucleic Acids Res., 2022)