Probing long-range interactions by extracting free energies from genome-wide chromosome conformation capture data. - Saeed Saberi; Pau Farré; Olivier Cuvier; Eldon Emberly (BMC Bioinform., 2015)

Optimization of atmospheric transport models on HPC platforms. - Raúl de la Cruz; Arnau Folch; Pau Farré; Javier Cabezas; Nacho Navarro; José María Cela (Comput. Geosci., 2016)

Improving the Interoperability between MPI and Task-Based Programming Models. - Kevin Sala; Jorge Bellón; Pau Farré; Xavier Teruel; Josep M. Pérez; Antonio J. Peña; Daniel J. Holmes; Vicenç Beltran 001; Jesús Labarta (EuroMPI, 2018)

A maximum-entropy model for predicting chromatin contacts. - Pau Farré; Eldon Emberly (PLoS Comput. Biol., 2018)

Milestones on the Quantum Utility Highway. - Catherine C. McGeoch; Pau Farré (SEC, 2022)

Hybrid quantum annealing for larger-than-QPU lattice-structured problems. - Jack Raymond; Radomir Stevanovic; William Bernoudy; Kelly Boothby; Catherine C. McGeoch; Andrew J. Berkley; Pau Farré; Andrew D. King (CoRR, 2022)

Tutorial: calibration refinement in quantum annealing. - Kevin Chern; Kelly Boothby; Jack Raymond; Pau Farré; Andrew D. King (Frontiers Comput. Sci., 2023)