How Many Transcripts Does It Take to Reconstruct the Splice Graph? - Paul A. Jenkins; Rune B. Lyngsø; Jotun Hein (WABI, 2006)

Inference from Samples of DNA Sequences Using a Two-Locus Model. - Paul A. Jenkins; Robert C. Griffiths (J. Comput. Biol., 2011)

Computational Inference Beyond Kingman's Coalescent. - Jere Koskela; Paul A. Jenkins; Dario Spanò (J. Appl. Probab., 2015)

Poisson Random Fields for Dynamic Feature Models. - Valerio Perrone; Paul A. Jenkins; Dario Spanò; Yee Whye Teh (J. Mach. Learn. Res., 2017)

A Likelihood-Free Inference Framework for Population Genetic Data using Exchangeable Neural Networks. - Jeffrey Chan; Valerio Perrone; Jeffrey P. Spence; Paul A. Jenkins; Sara Mathieson; Yun S. Song (NeurIPS, 2018)

Inference and rare event simulation for stopped Markov processes via reverse-time sequential Monte Carlo. - Jere Koskela; Dario Spanò; Paul A. Jenkins (Stat. Comput., 2018)

KwARG: parsimonious reconstruction of ancestral recombination graphs with recurrent mutation. - Anastasia Ignatieva; Rune B. Lyngsø; Paul A. Jenkins; Jotun Hein (Bioinform., 2021)

Feature Allocation Approach for Multimorbidity Trajectory Modelling. - Woojung Kim; Paul A. Jenkins; Christopher Yau (ML4H@NeurIPS, 2022)

EWF: simulating exact paths of the Wright-Fisher diffusion. - Jaromir Sant; Paul A. Jenkins; Jere Koskela; Dario Spanò (Bioinform., 2023)

Mixed Type Multimorbidity Variational Autoencoder: A Deep Generative Model for Multimorbidity Analysis. - Woojung Kim; Paul A. Jenkins; Christopher Yau (MLHC, 2024)