Mobile genes in the human microbiome are structured from global to individual scales. - Ilana L. Brito; Suzan A. Yilmaz; K. Huang; Liyi Xu; Stacy D. Jupiter; Aaron P. Jenkins; Waisea Naisilisili; Manu V. Tamminen; Chris S. Smillie; Jennifer R. Wortman; Bruce W. Birren; Ramnik J. Xavier; et al. (Nat., 2016)

A Bayesian model of acquisition and clearance of bacterial colonization. - Marko Järvenpää; Mohamad R. Abdul Sater; Georgia K. Lagoudas; Paul C. Blainey; Loren G. Miller; James A. McKinnell; Susan S. Huang; Yonatan H. Grad; Pekka Marttinen (CoRR, 2018)

A Bayesian model of acquisition and clearance of bacterial colonization incorporating within-host variation. - Marko Järvenpää; Mohamad R. Abdul Sater; Georgia K. Lagoudas; Paul C. Blainey; Loren G. Miller; James A. McKinnell; Susan S. Huang; Yonatan H. Grad; Pekka Marttinen (PLoS Comput. Biol., 2019)

Pseudo-Labeling Enhanced by Privileged Information and Its Application to In Situ Sequencing Images. - Marzieh Haghighi; Mario C. Cruz; Erin Weisbart; Beth A. Cimini; Avtar Singh; Julia Bauman; Maria E. Lozada; Sanam L. Kavari; James T. Neal; Paul C. Blainey; Anne E. Carpenter; Shantanu Singh (IJCAI, 2023)