Ergodicity and the Numerical Simulation of Hamiltonian Systems. - Paul F. Tupper (SIAM J. Appl. Dyn. Syst., 2005)

The Relation between Approximation in Distribution and Shadowing in Molecular Dynamics. - Paul F. Tupper (SIAM J. Appl. Dyn. Syst., 2009)

Improving the numerical convergence of viscous-plastic sea ice models with the Jacobian-free Newton-Krylov method. - Jean-François Lemieux; L. Bruno Tremblay; Jan Sedlácek; Paul F. Tupper; Stephen Thomas; David Huard; Jean-Pierre Auclair (J. Comput. Phys., 2010)

On the well-posedness of the stochastic Allen-Cahn equation in two dimensions. - Marc D. Ryser; Nilima Nigam; Paul F. Tupper (J. Comput. Phys., 2012)

Adult Category Learning Differences Predicted by a Dynamic Neural Field Theory Account of Information Sampled from the Fovea. - Jordan I. Barnes; Mark R. Blair; Paul F. Tupper; R. Calen Walshe (CogSci, 2013)

Exemplar Dynamics Models of the Stability of Phonological Categories. - Paul F. Tupper (CogSci, 2014)

Diversities and the Geometry of Hypergraphs. - David Bryant; Paul F. Tupper (Discret. Math. Theor. Comput. Sci., 2014)

A dynamic neural field model of self-regulated eye movements during category learning. - Jordan I. Barnes; Mark R. Blair; Paul F. Tupper; R. Calen Walshe (CogSci, 2015)

Which Algorithms Can and Can't Learn Identity Effects in Phonological Grammars. - Paul F. Tupper (CogSci, 2015)

Exemplar Dynamics and Sound Merger in Language. - Paul F. Tupper (SIAM J. Appl. Math., 2015)

A Dynamic Neural Field Model of Speech Cue Compensation. - Gavin W. Jenkins; Paul F. Tupper (CogSci, 2016)

Which Learning Algorithms Can Generalize Identity-Based Rules to Novel Inputs? - Paul F. Tupper; Bobak Shahriari (CogSci, 2016)

A modeling link between cognitive and biological homeostasis. - Gavin W. Jenkins; Jordan I. Barnes; Paul F. Tupper; Mark R. Blair (CogSci, 2017)

Fitting a Stochastic Model to Eye Movement Time Series in a Categorization Task. - Paul F. Tupper; Thuan Pham Nguyen; Yunlong Nie; Jiguo Cao; Liangliang Wang (CogSci, 2017)

Cross Modal Cue Compensation in Size and Pitch. - Gavin W. Jenkins; Paul F. Tupper (CogSci, 2018)

Game Theoretic Models of Clear versus Plain Speech. - Paul F. Tupper; Jie Jian; Keith King Wui Leung; Yue Wang 065 (CogSci, 2018)

Discrete symbolic optimization and Boltzmann sampling by continuous neural dynamics: Gradient Symbolic Computation. - Paul F. Tupper; Paul Smolensky; Pyeong Whan Cho (CoRR, 2018)

Negative type diversities, a multi-dimensional analogue of negative type metrics. - Pei Wu; David Bryant; Paul F. Tupper (CoRR, 2018)

Effects of limiting memory capacity on the behaviour of exemplar dynamics. - Benjamin Goodman; Paul F. Tupper (J. Appl. Probab., 2018)

A Dynamic Neural Gradient Model of Two-Item and Intermediate Transposition. - Gavin W. Jenkins; Paul F. Tupper (Neural Comput., 2018)

Stability and Fluctuations in a Simple Model of Phonetic Category Change. - Benjamin Goodman; Paul F. Tupper (SIAM J. Appl. Dyn. Syst., 2018)

Generalizing Outside the Training Set: When Can Neural Networks Learn Identity Effects? - Simone Brugiapaglia; Paul F. Tupper; Matthew Liu (CogSci, 2020)

Invariance, encodings, and generalization: learning identity effects with neural networks. - Simone Brugiapaglia; M. Liu; Paul F. Tupper (CoRR, 2021)

FraïSSé Limits for Relational Metric Structures. - David Bryant; André Nies; Paul F. Tupper (J. Symb. Log., 2021)

COVID-19 in schools: Mitigating classroom clusters in the context of variable transmission. - Paul F. Tupper; Caroline Colijn (PLoS Comput. Biol., 2021)

Invariance, Encodings, and Generalization: Learning Identity Effects With Neural Networks. - Simone Brugiapaglia; Matthew Liu; Paul F. Tupper (Neural Comput., 2022)

Diversities and the Generalized Circumradius. - David Bryant; Katharina T. Huber; Vincent Moulton; Paul F. Tupper (Discret. Comput. Geom., 2023)

Measuring genetic diversity across populations. - Niloufar Abhari; Caroline Colijn; Arne Mooers; Paul F. Tupper (PLoS Comput. Biol., 2024)

Expectation of speech style improves audio-visual perception of English vowels. - Joan A. Sereno; Allard Jongman; Yue Wang 065; Paul F. Tupper; Dawn M. Behne; Jetic Gu; Haoyao Ruan (Speech Commun., 2025)