A hidden Markov model with molecular mechanics energy-scoring function for transmembrane helix prediction. - W. Jim Zheng; Velin Z. Spassov; Lisa Yan; Paul K. Flook; Sándor Szalma (Comput. Biol. Chem., 2004)

Fully Automated Molecular Mechanics Based Induced Fit Protein-Ligand Docking Method. - Jurgen Koska; Velin Z. Spassov; Allister J. Maynard; Lisa Yan; Nic Austin; Paul K. Flook; C. M. Venkatachalam (J. Chem. Inf. Model., 2008)