ve-SEQ: Robust, unbiased enrichment for streamlined detection and whole-genome sequencing of HCV and other highly diverse pathogens. - David G. Bonsall; M. Azim Ansari; Camilla Ip; Amy Trebes; Anthony Brown 005; Paul Klenerman; David Buck; STOP-HCV Consortium; Paolo Piazza; Eleanor Barnes; Rory J. Bowden (F1000Research, 2015)

BreakAlign: a Perl program to align chimaeric (split) genomic NGS reads and allow visual confirmation of novel retroviral integrations. - Emanuele Marchi; Mathew Jones; Paul Klenerman; John Frater; Gkikas Magiorkinis; Robert Belshaw (BMC Bioinform., 2022)