Soup Over Bean of Pure Joy: Culinary Ruminations of an Artificial Chef. - Richard G. Morris; Scott H. Burton; Paul M. Bodily; Dan Ventura (ICCC, 2012)

Parallel Pair-HMM SNP Detection. - Nathan L. Clement; Brent A. Shepherd; Paul M. Bodily; Sukhbat Tumur-Ochir; Younghoon Gim; Quinn Snell; Mark J. Clement; W. Evan Johnson (IPDPS Workshops, 2012)

Application of a MAX-CUT Heuristic to the Contig Orientation Problem in Genome Assembly. - Paul M. Bodily; Mark J. Clement; Quinn Snell; Jared C. Price; Stanley Fujimoto; Nozomu Okuda (BCB, 2013)

Haplotype-centered mapping for improved alignments and genetic association studies. - Paul M. Bodily; Mark J. Clement; Quinn Snell; M. Stanley Fujimoto; Perry G. Ridge (BCB, 2014)

A structured approach to ensemble learning for Alzheimer's disease prediction. - Matthew Seeley; Mark J. Clement; Christophe G. Giraud-Carrier; Quinn Snell; Paul M. Bodily; Stanley Fujimoto (BCB, 2014)

Effects of error-correction of heterozygous next-generation sequencing data. - M. Stanley Fujimoto; Paul M. Bodily; Nozomu Okuda; Mark J. Clement; Quinn Snell (BMC Bioinform., 2014)

Heterozygous genome assembly via binary classification of homologous sequence. - Paul M. Bodily; M. Stanley Fujimoto; Cameron Ortega; Nozomu Okuda; Jared C. Price; Mark J. Clement; Quinn Snell (BMC Bioinform., 2015)

ScaffoldScaffolder: solving contig orientation via bidirected to directed graph reduction. - Paul M. Bodily; M. Stanley Fujimoto; Quinn Snell; Dan Ventura; Mark J. Clement (Bioinform., 2016)

A novel approach for multi-SNP GWAS and its application in Alzheimer's disease. - Paul M. Bodily; M. Stanley Fujimoto; Justin T. Page; Mark J. Clement; Mark T. W. Ebbert; Perry G. Ridge (BMC Bioinform., 2016)

Modeling Global and local Codon Bias with Deep Language Models. - Masaki Stanley Fujimoto; Paul M. Bodily; Cole A. Lyman; Andrew J. Jacobsen; Quinn Snell; Mark J. Clement (BIBE, 2017)

Genome Polymorphism Detection Through Relaxed de Bruijn Graph Construction. - M. Stanley Fujimoto; Cole A. Lyman; Anton Suvorov; Paul M. Bodily; Quinn Snell; Keith A. Crandall; Seth M. Bybee; Mark J. Clement (BIBE, 2017)

Whole Genome Phylogenetic Tree Reconstruction Using Colored de Bruijn Graphs. - Cole A. Lyman; M. Stanley Fujimoto; Anton Suvorov; Paul M. Bodily; Quinn Snell; Keith A. Crandall; Seth M. Bybee; Mark J. Clement (BIBE, 2017)

Text Transformation Via Constraints and Word Embedding. - Benjamin Bay; Paul M. Bodily; Dan Ventura (ICCC, 2017)

Computational Creativity via Human-Level Concept Learning. - Paul M. Bodily; Benjamin Bay; Dan Ventura (ICCC, 2017)

Explainability: An Aesthetic for Aesthetics in Computational Creative Systems. - Paul M. Bodily; Dan Ventura (ICCC, 2018)

"She Offered No Argument": Constrained Probabilistic Modeling for Mnemonic Device Generation. - Paul M. Bodily; Porter Glines; Brandon Biggs (ICCC, 2019)

Dynamically Scoring Rhymes with Phonetic Features and Sequence Alignment. - Benjamin Bay; Paul M. Bodily; Dan Ventura (ICTAI, 2019)

What Happens When a Computer Joins the Group? - Paul M. Bodily; Dan Ventura (ICCC, 2020)

Understanding and Strengthening the Computational Creativity Community: A Report From The Computational Creativity Task Force. - João Miguel Cunha; Sarah Harmon; Christian Guckelsberger; Anna Kantosalo; Paul M. Bodily; Kazjon Grace (ICCC, 2020)

A Leap of Creativity: From Systems that Generalize to Systems that Filter. - Porter Glines; Brandon Biggs; Paul M. Bodily (ICCC, 2020)

ERwEM: Events Represented with Emotive Music Using Topic-Filtered Tweets. - Makayla Harris; Hunter Harris; Paul M. Bodily (ICCC, 2020)

Exploring CC in XR: Visualizing Creative Conversation Topics to Facilitate Meaningful Face-to-Face Interaction. - Hunter Harris; Makayla Thompson; Isaac Griffith; Paul M. Bodily (ICCC, 2020)

Emotive Music Composition from Visual Sources of Inspiration. - Dylan Lasher; Tyler Hedgepeth; Nickolas Nathan Taylor; Paul M. Bodily (ICCC, 2020)

Creative Constellation Generation: A System Description. - Andres Sewell; Andrew Christiansen; Paul M. Bodily (ICCC, 2020)

Computational Humor: Automated Pun Generation. - Bradley Tyler; Katherine Wilsdon; Paul M. Bodily (ICCC, 2020)

Inferring Structural Constraints in Musical Sequences via Multiple Self-Alignment. - Paul M. Bodily; Dan Ventura (CogSci, 2021)

Software Design Patterns of Computational Creativity: A Systematic Mapping Study. - Porter Glines; Isaac Griffith; Paul M. Bodily (ICCC, 2021)

Implementation of an Anti-Plagiarism Constraint Model for Sequence Generation Systems. - Janita Aamir; Paul M. Bodily (ICCC, 2022)

Open Computational Creativity Problems in Computational Theory. - Paul M. Bodily; Dan Ventura (ICCC, 2022)

Steerable Music Generation which Satisfies Long-Range Dependency Constraints. - Paul M. Bodily; Dan Ventura (Trans. Int. Soc. Music. Inf. Retr., 2022)

Deciphering Student Coding Behavior: Interpretable Keystroke Features and Ensemble Strategies for Grade Prediction. - Muhammad Fawad Akbar Khan; John Edwards 002; Paul M. Bodily; Hamid Karimi (IEEE Big Data, 2023)

Operationalizing Essential Characteristics of Creativity in a Computational System for Music Composition. - Paul M. Bodily; Dan Ventura (AAAI, 2024)

Redux: An Interactive, Dynamic Knowledge Base for Teaching NP-completeness. - Kaden Marchetti; Andrija Sevaljevic; Alex Diviney; Caleb Eardley; Russell Phillips; Rajiv Khadka; Daniel Igbokwe; Paul M. Bodily (ITiCSE (1), 2024)