Bioinformatics: Genomic Data Representation through Images - MAGPIE as an Example. - Paul M. K. Gordon; Terry Gaasterland; Christoph W. Sensen (Essentials of Genomics and Bioinformatics, 2002)

Bioinformatics visualization and integration with open standards: the Bluejay genomic browser. - Andrei L. Turinsky; Andrew C. Ah-Seng; Paul M. K. Gordon; Julie N. Stromer; Morgan L. Taschuk; Emily W. Xu; Christoph W. Sensen (Silico Biol., 2004)

Jabiru: Harnessing Java 3D Behaviors for Device and Display Portability. - Julie N. Stromer; Gerald T. Quon; Paul M. K. Gordon; Andrei L. Turinsky; Christoph W. Sensen (IEEE Computer Graphics and Applications, 2005)

Combining a High-Throughput Bioinformatics Grid and Bioinformatics Web Services. - Chunyan Wang 002; Paul M. K. Gordon; Andrei L. Turinsky; Jason Burgess; Terry Dalton; Christoph W. Sensen (GCCB, 2006)

Enhancing Bluejay with Scalability, Genome Comparison and Microarray Visualization. - Anguo Dong; Andrei L. Turinsky; Andrew C. Ah-Seng; Morgan L. Taschuk; Paul M. K. Gordon; Katharina Hochauer; Sabrina Fröls; Jung Soh; Christoph W. Sensen (GfKl, 2006)

Bluejay: A Highly Scalable and Integrative Visual Environment for Genome Exploration. - Jung Soh; Paul M. K. Gordon; Andrew C. Ah-Seng; Andrei L. Turinsky; Morgan L. Taschuk; Krzysztof Borowski; Christoph W. Sensen (IEEE SCW, 2007)

Using a Novel Data Transformation Technique to Provide the EMBOSS Software Suite as Semantic Web Services. - Paul M. K. Gordon; Edward A. Kawas; Mark D. Wilkinson; Christoph W. Sensen (BIBM, 2007)

Semantic Web Service provision: a realistic framework for Bioinformatics programmers. - Paul M. K. Gordon; Quang Trinh; Christoph W. Sensen (Bioinform., 2007)

Seahawk: moving beyond HTML in Web-based bioinformatics analysis. - Paul M. K. Gordon; Christoph W. Sensen (BMC Bioinform., 2007)

Creating Bioinformatics Semantic Web Services from Existing Web Services: A Real-World Application of SAWSDL. - Paul M. K. Gordon; Christoph W. Sensen (ICWS, 2008)

Bluejay 1.0: genome browsing and comparison with rich customization provision and dynamic resource linking. - Jung Soh; Paul M. K. Gordon; Morgan L. Taschuk; Anguo Dong; Andrew C. Ah-Seng; Andrei L. Turinsky; Christoph W. Sensen (BMC Bioinform., 2008)

Helping Biologists Effectively Build Workflows, without Programming. - Paul M. K. Gordon; Ken Barker 001; Christoph W. Sensen (DILS, 2010)

Programming-by-Example Meets the Semantic Web: Using Ontologies and Web Services to Close the Semantic Gap. - Paul M. K. Gordon; Ken Barker 001; Christoph W. Sensen (VL/HCC, 2010)

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. - Toshiaki Katayama; Kazuharu Arakawa; Mitsuteru Nakao; Keiichiro Ono; Kiyoko F. Aoki-Kinoshita; Yasunori Yamamoto; Atsuko Yamaguchi; Shuichi Kawashima; Hong-Woo Chun; Jan Aerts; Bruno Aranda; Lord H. Barboza; et al. (J. Biomed. Semant., 2010)

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications. - Toshiaki Katayama; Mark D. Wilkinson; Rutger A. Vos; Takeshi Kawashima; Shuichi Kawashima; Mitsuteru Nakao; Yasunori Yamamoto; Hong-Woo Chun; Atsuko Yamaguchi; Shin Kawano; Jan Aerts; Kiyoko F. Aoki-Kinoshita; et al. (J. Biomed. Semant., 2011)

SnowyOwl: accurate prediction of fungal genes by using RNA-Seq and homology information to select among ab initio models. - Ian Reid 002; Nicholas O'Toole; Omar Zabaneh; Reza Nourzadeh; Mahmoud Dahdouli; Mostafa Abdellateef; Paul M. K. Gordon; Jung Soh; Gregory Butler; Christoph W. Sensen; Adrian Tsang (BMC Bioinform., 2014)

Oxford nanopore sequencing in clinical microbiology and infection diagnostics. - Dropen Sheka; Nikolay Alabi; Paul M. K. Gordon (Briefings Bioinform., 2021)

Evaluating the effectiveness of ensemble voting in improving the accuracy of consensus signals produced by various DTWA algorithms from step-current signals generated during nanopore sequencing. - Michael R. Smith 001; Rachel Chan; Maaz Khurram; Paul M. K. Gordon (PLoS Comput. Biol., 2021)