Sub-population analysis based on temporal features of high content images. - Merlin Veronika; James Evans; Paul Matsudaira; Roy E. Welsch; Jagath C. Rajapakse (BMC Bioinform., 2009)

Quantification of Cytoskeletal Protein Localization from High-Content Images. - Shiwen Zhu; Paul Matsudaira; Roy E. Welsch; Jagath C. Rajapakse (PRIB, 2010)

High-End Biological Imaging Generates Very Large 3D+ and Dynamic Datasets. - Paul Matsudaira (Proc. VLDB Endow., 2010)

Correlation of cell membrane dynamics and cell motility. - Merlin Veronika; Roy E. Welsch; Alvin Ng; Paul Matsudaira; Jagath C. Rajapakse (BMC Bioinform., 2011)

A method to quantify co-localization in biological images. - Shiwen Zhu; Roy E. Welsch; Paul Matsudaira (EMBC, 2016)

Extending the Martini Coarse-Grained Force Field to N-Glycans. - Aishwary T. Shivgan; Jan K. Marzinek; Roland G. Huber; Alexander Krah; Richard H. Henchman; Paul Matsudaira; Chandra S. Verma 001; Peter J. Bond (J. Chem. Inf. Model., 2020)