Comparing Java Agents and MPI for Writing Parallel Algorithms. - John Kochmar; Paul Nowoczynski; J. Ray Scott; Nathan Stone (PDPTA, 1999)

Alnilam: An Extensible Python-Based Job Scheduler. - John Kochmar; Paul Nowoczynski; J. Ray Scott; Jason Sommerfield; Nathan Stone (PDPTA, 2000)

Terascale I/O Solutions. - Nathan Stone; John Kochmar; Paul Nowoczynski; J. Ray Scott; Derek Simmel; Jason Sommerfield; Chad Vizino (International Conference on Computational Science, 2003)

Slash - The Scalable Lightweight Archival Storage Hierarchy. - Paul Nowoczynski; Nathan Stone; Jason Sommerfield; Bryon Gill; J. Ray Scott (MSST, 2005)

PDIO: High-Performance Remote File I/O for Portals-Enabled Compute Nodes. - Nathan Stone; Doug Balog; Bryon Gill; Brian Johanson; Jim Marsteller; Paul Nowoczynski; David Porter; Raghurama Reddy; J. Ray Scott; Derek Simmel; Jason Sommerfield; Katie Vargo; et al. (PDPTA, 2006)

PLFS: a checkpoint filesystem for parallel applications. - John Bent; Garth A. Gibson; Gary Grider; Ben McClelland; Paul Nowoczynski; James Nunez; Milo Polte; Meghan Wingate (SC, 2009)

The data supercell. - Paul Nowoczynski; Jason Sommerfield; Jared Yanovich; J. Ray Scott; Zhihui Zhang; Michael Levine (XSEDE, 2012)