A TinyOS-enabled MICA2-BasedWireless neural interface. - Shahin Farshchi; Paul Nuyujukian; Aleksey Pesterev; István Módy; Jack W. Judy (IEEE Trans. Biomed. Eng., 2006)

Bi-Fi: An Embedded Sensor/System Architecture for Remote Biological Monitoring. - Shahin Farshchi; Alex Pesterev; Paul Nuyujukian; István Módy; Jack W. Judy (IEEE Trans. Inf. Technol. Biomed., 2007)

HermesC: RF wireless low-power neural recording system for freely behaving primates. - Cynthia A. Chestek; Vikash Gilja; Paul Nuyujukian; Stephen I. Ryu; Krishna V. Shenoy; Ryan J. Kier (ISCAS, 2008)

Wireless neural signal acquisition with single low-power integrated circuit. - Reid R. Harrison; Ryan J. Kier; Bradley Greger; Florian Solzbacher; Cynthia A. Chestek; Vikash Gilja; Paul Nuyujukian; Stephen I. Ryu; Krishna V. Shenoy (ISCAS, 2008)

Monkey models for brain-machine interfaces: The need for maintaining diversity. - Paul Nuyujukian; Joline M. Fan; Vikash Gilja; Paul S. Kalanithi; Cindy A. Chestek; Krishna V. Shenoy (EMBC, 2011)

A Brain-Machine Interface Operating with a Real-Time Spiking Neural Network Control Algorithm. - Julie Dethier; Paul Nuyujukian; Chris Eliasmith; Terrence C. Stewart; Shauki A. Elasaad; Krishna V. Shenoy; Kwabena Boahen 001 (NIPS, 2011)

A framework for relating neural activity to freely moving behavior. - Justin D. Foster; Paul Nuyujukian; Oren Freifeld; Stephen I. Ryu; Michael J. Black; Krishna V. Shenoy (EMBC, 2012)

A brain machine interface control algorithm designed from a feedback control perspective. - Vikash Gilja; Paul Nuyujukian; Cindy A. Chestek; John P. Cunningham; Byron M. Yu; Joline M. Fan; Stephen I. Ryu; Krishna V. Shenoy (EMBC, 2012)

HermesE: A 96-Channel Full Data Rate Direct Neural Interface in 0.13 µm CMOS. - Hua Gao; Ross M. Walker; Paul Nuyujukian; Kofi A. A. Makinwa; Krishna V. Shenoy; Boris Murmann; Teresa H. Meng (IEEE J. Solid State Circuits, 2012)

Investigating the role of firing-rate normalization and dimensionality reduction in brain-machine interface robustness. - Jonathan C. Kao; Paul Nuyujukian; Sergey D. Stavisky; Stephen I. Ryu; Surya Ganguli; Krishna V. Shenoy (EMBC, 2013)

Hybrid decoding of both spikes and low-frequency local field potentials for brain-machine interfaces. - Sergey D. Stavisky; Jonathan C. Kao; Paul Nuyujukian; Stephen I. Ryu; Krishna V. Shenoy (EMBC, 2014)

Information Systems Opportunities in Brain-Machine Interface Decoders. - Jonathan C. Kao; Sergey D. Stavisky; David Sussillo; Paul Nuyujukian; Krishna V. Shenoy (Proc. IEEE, 2014)

A High-Performance Keyboard Neural Prosthesis Enabled by Task Optimization. - Paul Nuyujukian; Joline M. Fan; Jonathan C. Kao; Stephen I. Ryu; Krishna V. Shenoy (IEEE Trans. Biomed. Eng., 2015)

A Nonhuman Primate Brain-Computer Typing Interface. - Paul Nuyujukian; Jonathan C. Kao; Stephen I. Ryu; Krishna V. Shenoy (Proc. IEEE, 2017)

A High-Performance Neural Prosthesis Incorporating Discrete State Selection With Hidden Markov Models. - Jonathan C. Kao; Paul Nuyujukian; Stephen I. Ryu; Krishna V. Shenoy (IEEE Trans. Biomed. Eng., 2017)

An open-source realtime computational platform (short WIP paper). - Pavan Mehrotra; Sabar Dasgupta; Samantha Robertson; Paul Nuyujukian (LCTES, 2018)

Feasibility of Automatic Error Detect-and-Undo System in Human Intracortical Brain-Computer Interfaces. - Nir Even-Chen; Sergey D. Stavisky; Chethan Pandarinath; Paul Nuyujukian; Christine H. Blabe; Leigh R. Hochberg; Jaimie M. Henderson; Krishna V. Shenoy (IEEE Trans. Biomed. Eng., 2018)

A markerless platform for ambulatory systems neuroscience. - Michael P. Silvernagel; Alissa S. Ling; Paul Nuyujukian (Sci. Robotics, 2021)

Leveraging DevOps for Scientific Computing. - Paul Nuyujukian (CoRR, 2023)

An open framework for archival, reproducible, and transparent science. - Sabar Dasgupta; Paul Nuyujukian (CoRR, 2025)