Theater-Style Demonstration: The Regenstrief Medical Record System 1997: A System for Clinical, Pervasive and City-Wide Computing. - Clement J. McDonald; J. Marc Overhage; William M. Tierney; Paul R. Dexter; Blaine Y. Takesue; Brenda Smith; Terry Hogan; Lonnie Blevins; Jill Warvel; Jeff S. Warvel; Jim Meeks-Johnson; Larry Lemmon; et al. (AMIA, 1997)

The Regenstrief Medical Record System 1998: A System for City-Wide Computing. - Clement J. McDonald; J. Marc Overhage; William M. Tierney; Paul R. Dexter; Jeffrey G. Suico; Atif Zafar; Brenda Smith; Terry Hogan; Lonnie Blevins; Jill Warvel; Jeff S. Warvel; Jim Meeks-Johnson; et al. (AMIA, 1998)

The Regenstrief Medical Record System 1999: Sharing Data Between Hospitals. - Clement J. McDonald; J. Marc Overhage; Paul R. Dexter; William M. Tierney; Jeffrey G. Suico; Alex M. Aisen; Atif Zafar; Gunther Schadow; Lonnie Blevins; Jill Warvel; Jeff S. Warvel; Jim Meeks-Johnson; et al. (AMIA, 1999)

The Regenstrief Medical Record System: a quarter century experience. - Clement J. McDonald; J. Marc Overhage; William M. Tierney; Paul R. Dexter; Douglas K. Martin; Jeffrey G. Suico; Atif Zafar; Gunther Schadow; Lonnie Blevins; Tull T. Glazener; Jim Meeks-Johnson; Larry Lemmon; et al. (Int. J. Medical Informatics, 1999)

The Regenstrief Medical Record System: 30 Years of Learning. - Clement J. McDonald; Michael Barnes; J. Marc Overhage; Jeffrey G. Suico; Paul R. Dexter; Gunther Schadow; Burke W. Mamlin; Atif Zafar; William M. Tierney; Lonnie Blevins; Larry Lemmon; Tull T. Glazener; et al. (AMIA, 2001)

Secure Internet video conferencing for assessing acute medical problems in a nursing facility. - Michael Weiner 002; Gunther Schadow; Donald Lindbergh; Jill Warvel; Greg Abernathy; Paul R. Dexter; Clement J. McDonald (AMIA, 2001)

A modern optical character recognition system in a real world clinical setting: some accuracy and feasibility observations. - Paul G. Biondich; J. Marc Overhage; Paul R. Dexter; Stephen M. Downs; Larry Lemmon; Clement J. McDonald (AMIA, 2002)

The Regenstrief Medical Record System 2002: Focus on the Medical Gopher Clinical Workstation. - Clement J. McDonald; J. Marc Overhage; Paul R. Dexter; Michael Barnes; Jeffrey G. Suico; Michael Weiner 002; Gunther Schadow; Greg Abernathy; William M. Tierney; Lonnie Blevins; Larry Lemmon; Tull T. Glazener; et al. (AMIA, 2002)

Conducting a study of Internet-based video conferencing for assessing acute medical problems in a nursing facility. - Michael Weiner 002; Gunther Schadow; Donald Lindbergh; Jill Warvel; Greg Abernathy; Susan M. Perkins; Paul R. Dexter; Clement J. McDonald (AMIA, 2002)

Community Clinical Data Exchange for Emergency Medicine Patients. - John T. Finnell; J. Marc Overhage; Paul R. Dexter; Susan M. Perkins; Kathleen A. Lane; Clement J. McDonald (AMIA, 2003)

Computerized Reminders for Syphilis Screening in an Urban Emergency Department. - Marc B. Rosenman; Jane Wang; Paul R. Dexter; J. Marc Overhage (AMIA, 2003)

Clinicians' and Patients' Experiences and Satisfaction with Unscheduled, Nighttime, Internet-based Video Conferencing for Assessing Acute Medical Problems in a Nursing Facility. - Michael Weiner 002; Gunther Schadow; Donald Lindbergh; Jill Warvel; Greg Abernathy; Susan M. Perkins; Joanne Fyffe; Paul R. Dexter; Clement J. McDonald (AMIA, 2003)

Open Source software in medical informatics - why, how and what. - Clement J. McDonald; Gunther Schadow; Michael Barnes; Paul R. Dexter; J. Marc Overhage; Burke W. Mamlin; J. Michael McCoy (Int. J. Medical Informatics, 2003)

Editorial Comments: Physicians, Information Technology, and Health Care Systems: A Journey, Not a Destination. - Clement J. McDonald; J. Marc Overhage; Burke W. Mamlin; Paul R. Dexter; William M. Tierney (J. Am. Medical Informatics Assoc., 2004)

Computerized Reminders to Improve Isolation Rates of Patients with Drug-Resistant Infections: Design and Preliminary Results. - Abel N. Kho; Paul R. Dexter; Jeff S. Warvel; Marie Commiskey; Steve Wilson; Clement J. McDonald (AMIA, 2005)

Efficiency, Comprehensiveness and Cost-effectiveness when comparing Dictation and Electronic Templates for Operative Reports. - Mark Laflamme; Paul R. Dexter; Marilyn F. Graham; Siu L. Hui; Clement J. McDonald (AMIA, 2005)

SPIN Query Tools for De-identified Research on a Humongous Database. - Clement J. McDonald; Paul R. Dexter; Gunther Schadow; Henry C. Chueh; Greg Abernathy; John Hook; Lonnie Blevins; J. Marc Overhage; Jules J. Berman (AMIA, 2005)

A Computerized Decision Support System Improves the Accuracy of Temperature Capture from Nursing Personnel at the Bedside. - Philip J. Kroth; Paul R. Dexter; J. Marc Overhage; Cynthia Knipe; Siu L. Hui; Anne W. Belsito; Clement J. McDonald (AMIA, 2006)

Demonstration of the Indianapolis SPIN Query Tool for De-identified Access to Content of the Indiana Network for Patient Care's (a Real RHIO) Database. - Clement J. McDonald; Lonnie Blevins; Paul R. Dexter; Gunther Schadow; John Hook; Greg Abernathy; Tammy Dugan; Andrew Martin; D. Ryan Phillips; Mary Davis (AMIA, 2006)

Details of a Successful Clinical Decision Support System. - Jeff Friedlin; Paul R. Dexter; J. Marc Overhage (AMIA, 2007)

Connecting the Dots: Creation of an Electronic Regional Infection Control Network. - Abel N. Kho; Paul R. Dexter; Larry Lemmon; Dauna Carey; Heather Woodward-Hagg; Steve Hare; Bradley N. Doebbeling (MedInfo, 2007)

Embracing Change in a Health Information Exchange. - Daniel J. Vreeman; Marilyn Stark; Gail L. Tomashefski; D. Ryan Phillips; Paul R. Dexter (AMIA, 2008)

An effective computerized reminder for contact isolation of patients colonized or infected with resistant organisms. - Abel N. Kho; Paul R. Dexter; Jeff S. Warvel; Anne W. Belsito; Marie Commiskey; Stephen J. Wilson; Siu L. Hui; Clement J. McDonald (Int. J. Medical Informatics, 2008)

An Efficient Pancreatic Cyst Identification Methodology Using Natural Language Processing. - Saeed Mehrabi 003; C. Max Schmidt; Joshua A. Waters; Chris Beesley; Anand Krishnan; Joe Kesterson; Paul R. Dexter; Mohammed A. Al-Haddad; William M. Tierney; Mathew J. Palakal (MedInfo, 2013)

Adherence to drug-drug interaction alerts in high-risk patients: a trial of context-enhanced alerting. - Jon D. Duke; Xiaochun Li; Paul R. Dexter (J. Am. Medical Informatics Assoc., 2013)

Regenstrief Institute's Medical Gopher: A next-generation homegrown electronic medical record system. - Jon D. Duke; Justin Morea; Burke W. Mamlin; Douglas K. Martin; Linas Simonaitis; Blaine Y. Takesue; Brian E. Dixon; Paul R. Dexter (Int. J. Medical Informatics, 2014)

Identification of Patients with Family History of Pancreatic Cancer - Investigation of an NLP System Portability. - Saeed Mehrabi 003; Anand Krishnan; Alexandra M. Roch; Heidi Schmidt; Dingcheng Li; Joe Kesterson; Chris Beesley; Paul R. Dexter; C. Max Schmidt; Mathew J. Palakal; Hongfang Liu (MedInfo, 2015)

DEEPEN: A negation detection system for clinical text incorporating dependency relation into NegEx. - Saeed Mehrabi 003; Anand Krishnan; Sunghwan Sohn; Alexandra M. Roch; Heidi Schmidt; Joe Kesterson; Chris Beesley; Paul R. Dexter; C. Max Schmidt; Hongfang Liu; Mathew J. Palakal (J. Biomed. Informatics, 2015)

Creating a Cluster of Preclinical Lessons Using Pharmacogenomic-Focused Patient Case Presentations. - Blaine Y. Takesue; Maureen Harrington; Bradley Allen; Debra Litzelman; Paul R. Dexter (AMIA, 2017)

Physician prescribing and patient usage patterns of sleeping medications: Opportunities for clinical decision support. - Paul R. Dexter; Mark Marsico; Siu L. Hui; Edward Bortnichak; Ross Hayden; Abby Church; Zhiwen Liu (AMIA, 2018)

Identifying dominant inpatient trends leveraging electronic physician orders: The Medical Gopher 1993-2016. - Paul R. Dexter; Jeff S. Warvel; Blaine Y. Takesue (AMIA, 2018)

Development and Implementation of Genomic Data Pipelines within US institutions: A pilot multi-site survey among NHGRI's IGNITE Genomic Medicine Sites. - Josh F. Peterson; Henry H. Ong; Julie A. Lynch; J. Kevin Hicks; Paul R. Dexter (AMIA, 2018)

Admission opiate ordering patterns over 23 years: analysis of electronic health record data from the Regenstrief Gopher. - Blaine Y. Takesue; Jeff S. Warvel; Paul R. Dexter (AMIA, 2018)

Development of a Genomic Data Flow Framework: Results of a Survey Administered to NIH-NHGRI IGNITE and eMERGE Consortia Participants. - Paul R. Dexter; Henry H. Ong; Amanda Elsey; Gillian Bell; Nephi Walton; Wendy K. Chung; Luke V. Rasmussen; J. Kevin Hicks; Aniwaa Owusu-obeng; Stuart A. Scott; Stephen B. Ellis; Josh F. Peterson (AMIA, 2019)

Transforming primary medical research knowledge into clinical decision support rules. - Paul R. Dexter; Randall W. Grout; Peter J. Embí (AMIA, 2020)

Golden opportunities for clinical decision support in an era of team-based medical care. - Paul R. Dexter; Titus K. Schleyer (AMIA, 2021)

Applying interpretable deep learning models to identify chronic cough patients using EHR data. - Xiao Luo 002; Priyanka Gandhi; Zuoyi Zhang; Wei Shao 005; Zhi Han; Vasu Chandrasekaran; Vladimir Turzhitsky; Vishal Bali; Anna R. Roberts; Megan Metzger; Jarod Baker; Carmen La Rosa; et al. (Comput. Methods Programs Biomed., 2021)

Application of unsupervised deep learning algorithms for identification of specific clusters of chronic cough patients from EMR data. - Wei Shao 005; Xiao Luo 002; Zuoyi Zhang; Zhi Han; Vasu Chandrasekaran; Vladimir Turzhitsky; Vishal Bali; Anna R. Roberts; Megan Metzger; Jarod Baker; Carmen La Rosa; Jessica Weaver; et al. (BMC Bioinform., 2022)