An approximate but efficient method to calculate free energy trends by computer simulation: Application to dihydrofolate reductase-inhibitor complexes. - Paul R. Gerber; Alan E. Mark; Wilfred F. van Gunsteren (J. Comput. Aided Mol. Des., 1993)

MAB, a generally applicable molecular force field for structure modelling in medicinal chemistry. - Paul R. Gerber; Klaus Müller (J. Comput. Aided Mol. Des., 1995)

Charge distribution from a simple molecular orbital type calculation and non-bonding interaction terms in the force field MAB. - Paul R. Gerber (J. Comput. Aided Mol. Des., 1998)

An Automated System for the Analysis of G Protein-Coupled Receptor Transmembrane Binding Pockets: Alignment, Receptor-Based Pharmacophores, and Their Application. - Nicole A. Kratochwil; Pari Malherbe; Lothar Lindemann; Martin Ebeling; Marius C. Hoener; Andreas Mühlemann; Richard H. P. Porter; Martin Stahl; Paul R. Gerber (J. Chem. Inf. Model., 2005)