Inspiration for the Next Generation of Artificial Immune Systems. - Paul S. Andrews; Jon Timmis (ICARIS, 2005)

On Diversity and Artificial Immune Systems: Incorporating a Diversity Operator into aiNet. - Paul S. Andrews; Jon Timmis (WIRN/NAIS, 2005)

An Investigation into Mutation Operators for Particle Swarm Optimization. - Paul S. Andrews (IEEE Congress on Evolutionary Computation, 2006)

A Computational Model of Degeneracy in a Lymph Node. - Paul S. Andrews; Jon Timmis (ICARIS, 2006)

The Immune System in Pieces: Computational Lessons from Degeneracy in the Immune System. - Miguel Mendao; Jonathan Timmis; Paul S. Andrews; Matthew N. Davies (FOCI, 2007)

Investigating Patterns for the Process-Oriented Modelling and Simulation of Space in Complex Systems. - Paul S. Andrews; Adam T. Sampson; John Markus Bjørndalen; Susan Stepney; Jon Timmis; Douglas N. Warren; Peter H. Welch (ALIFE, 2008)

Adaptable Lymphocytes for Artificial Immune Systems. - Paul S. Andrews; Jon Timmis (ICARIS, 2008)

Empirical Investigation of an Artificial Cytokine Network. - Mark Read 001; Jon Timmis; Paul S. Andrews (ICARIS, 2008)

Immune Systems and Computation: An Interdisciplinary Adventure. - Jon Timmis; Paul S. Andrews; Nick D. L. Owens; Edward Clark (UC, 2008)

An interdisciplinary perspective on artificial immune systems. - Jonathan Timmis; Paul S. Andrews; Nick D. L. Owens; Edward Clark (Evol. Intell., 2008)

Modelling and simulation of granuloma formation in visceral leishmaniasis. - Anton J. Flugge; Jon Timmis; Paul S. Andrews; John Moore; Paul M. Kaye (IEEE Congress on Evolutionary Computation, 2009)

The engineering of concurrent simulations of complex systems. - Fiona A. C. Polack; Paul S. Andrews; Adam T. Sampson (IEEE Congress on Evolutionary Computation, 2009)

Birds on the wall: Distributing a process-oriented simulation. - Adam T. Sampson; John Markus Bjørndalen; Paul S. Andrews (IEEE Congress on Evolutionary Computation, 2009)

Using UML to Model EAE and Its Regulatory Network. - Mark Read 001; Jon Timmis; Paul S. Andrews; Vipin Kumar (ICARIS, 2009)

A Petri Net Model of Granulomatous Inflammation. - Luca Albergante; Jon Timmis; Paul S. Andrews; Lynette Beattie; Paul M. Kaye (ICARIS, 2010)

Reflections on the Simulation of Complex Systems for Science. - Fiona A. C. Polack; Paul S. Andrews; Teodor Ghetiu; Mark Read 001; Susan Stepney; Jon Timmis; Adam T. Sampson (ICECCS, 2010)

Special issue on artificial immune systems. - Jon Timmis; Paul S. Andrews; Emma Hart (Swarm Intell., 2010)

On artificial immune systems and swarm intelligence. - Jon Timmis; Paul S. Andrews; Emma Hart (Swarm Intell., 2010)

Towards Argument-Driven Validation of an in silico Model of Immune Tissue Organogenesis. - Kieran Alden; Paul S. Andrews; Jon Timmis; Henrique Veiga-Fernandes; Mark C. Coles (ICARIS, 2011)

In Silico Investigation into CD8Treg Mediated Recovery in Murine Experimental Autoimmune Encephalomyelitis. - Richard Alun Williams; Mark Read 001; Jon Timmis; Paul S. Andrews; Vipin Kumar (ICARIS, 2011)

Object Store Based Simulation Interworking. - Carl G. Ritson; Paul S. Andrews; Adam T. Sampson (CPA, 2011)

Editorial for special issue on the interaction between computation and biology. - Jon Timmis; Paul S. Andrews; Susan Stepney (Nat. Comput., 2011)

Preface. - Jon Timmis; Paul S. Andrews; Andrew Hone (Theor. Comput. Sci., 2011)

Extending an Established Simulation: Exploration of the Possible Effects Using a Case Study in Experimental Autoimmune Encephalomyelitis. - Richard B. Greaves; Mark Read 001; Jon Timmis; Paul S. Andrews; Vipin Kumar (IPCAT, 2012)

Preface: EmergeNET4: engineering emergence. - Paul S. Andrews; Susan Stepney (Nat. Comput., 2012)

An Introduction to Artificial Immune Systems. - Mark Read 001; Paul S. Andrews; Jon Timmis (Handbook of Natural Computing, 2012)

In silico investigation of novel biological pathways: The role of CD200 in regulation of T cell priming in experimental autoimmune encephalomyelitis. - Richard B. Greaves; Mark Read 001; Jon Timmis; Paul S. Andrews; James A. Butler; Björn-Ole Gerckens; Vipin Kumar (Biosyst., 2013)

In silico investigation into dendritic cell regulation of CD8Treg mediated killing of Th1 cells in murine experimental autoimmune encephalomyelitis. - Richard Alun Williams; Richard B. Greaves; Mark Read 001; Jon Timmis; Paul S. Andrews; Vipin Kumar (BMC Bioinform., 2013)

Spartan: A Comprehensive Tool for Understanding Uncertainty in Simulations of Biological Systems. - Kieran Alden; Mark Read 001; Jonathan Timmis; Paul S. Andrews; Henrique Veiga-Fernandes; Mark C. Coles (PLoS Comput. Biol., 2013)

Applying spartan to Understand Parameter Uncertainty in Simulations. - Kieran Alden; Mark Read 001; Paul S. Andrews; Jon Timmis; Mark C. Coles (R J., 2014)

A Metamodel for the Evolution of Evolution. - Paul S. Andrews; Susan Stepney (ECAL, 2015)

Utilising a simulation platform to understand the effect of domain model assumptions. - Kieran Alden; Paul S. Andrews; Henrique Veiga-Fernandes; Jon Timmis; Mark C. Coles (Nat. Comput., 2015)

CoSMoS special issue editorial. - Susan Stepney; Paul S. Andrews (Nat. Comput., 2015)

Extending and Applying Spartan to Perform Temporal Sensitivity Analyses for Predicting Changes in Influential Biological Pathways in Computational Models. - Kieran Alden; Jon Timmis; Paul S. Andrews; Henrique Veiga-Fernandes; Mark C. Coles (IEEE ACM Trans. Comput. Biol. Bioinform., 2017)

Strategies for calibrating models of biology. - Mark N. Read; Kieran Alden; Jon Timmis; Paul S. Andrews (Briefings Bioinform., 2020)