Nonlinear filters in genomic control. - Edward R. Dougherty; Michael L. Bittner; Yidong Chen 002; Seungchan Kim; Krishnamoorthy Sivakumar; Junior Barrera; Paul S. Meltzer; Jeffrey M. Trent (NSIP, 1999)

Ratio statistics of gene expression levels and applications to microarray data analysis. - Yidong Chen 002; Vishnu G. Kamat; Edward R. Dougherty; Michael L. Bittner; Paul S. Meltzer; Jeffrey M. Trent (Bioinform., 2002)

Are We There Yet? Genomic Profiling and Mechanism in Cancer Research. - Paul S. Meltzer; Sean R. Davis; Kristin Baird; Yidong Chen 002 (CSB, 2004)

GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor. - Sean R. Davis; Paul S. Meltzer (Bioinform., 2007)

A probe-density-based analysis method for array CGH data: simulation, normalization and centralization. - Hung-I Harry Chen; Fang-Han Hsu; Yuan Jiang; Mong-Hsun Tsai; Pan-Chyr Yang; Paul S. Meltzer; Eric Y. Chuang; Yidong Chen 002 (Bioinform., 2008)

GEOmetadb: powerful alternative search engine for the Gene Expression Omnibus. - Yuelin Zhu; Sean R. Davis; Robert M. Stephens; Paul S. Meltzer; Yidong Chen 002 (Bioinform., 2008)

Chromatin structure fully determines replication timing program in human cells. - Sven Bilke; Yevgeniy Gindin; Paul S. Meltzer (BCB, 2013)

RCircos: an R package for Circos 2D track plots. - Hongen Zhang; Paul S. Meltzer; Sean Davis 001 (BMC Bioinform., 2013)

SRAdb: query and use public next-generation sequencing data from within R. - Yuelin Zhu; Robert M. Stephens; Paul S. Meltzer; Sean R. Davis (BMC Bioinform., 2013)

caOmicsV: an R package for visualizing multidimensional cancer genomic data. - Hongen Zhang; Paul S. Meltzer; Sean R. Davis (BMC Bioinform., 2016)

Pan-cancer genome and transcriptome analyses of 1, 699 paediatric leukaemias and solid tumours. - Xiaotu Ma; Yu Liu; Yanling Liu; Ludmil B. Alexandrov; Michael N. Edmonson; Charles Gawad; Xin Zhou; Yongjin Li; Michael Rusch; John Easton; Robert Huether; Veronica Gonzalez-Pena; et al. (Nat., 2018)