Comparison of methods for calculating conditional expectations of sufficient statistics for continuous time Markov chains. - Paula Tataru; Asger Hobolth (BMC Bioinform., 2011)

Evolving stochastic context-free grammars for RNA secondary structure prediction. - James W. J. Anderson; Paula Tataru; Joe Staines; Jotun Hein; Rune B. Lyngsø (BMC Bioinform., 2012)

Oxfold: kinetic folding of RNA using stochastic context-free grammars and evolutionary information. - James W. J. Anderson; Pierre A. Haas; Leigh-Anne Mathieson; Vladimir Volynkin; Rune B. Lyngsø; Paula Tataru; Jotun Hein (Bioinform., 2013)

diCal-IBD: demography-aware inference of identity-by-descent tracts in unrelated individuals. - Paula Tataru; Jasmine A. Nirody; Yun S. Song (Bioinform., 2014)

Regmex: a statistical tool for exploring motifs in ranked sequence lists from genomics experiments. - Morten Muhlig Nielsen; Paula Tataru; Tobias Madsen; Asger Hobolth; Jakob Skou Pedersen (Algorithms Mol. Biol., 2018)

polyDFEv2.0: testing for invariance of the distribution of fitness effects within and across species. - Paula Tataru; Thomas Bataillon (Bioinform., 2019)