Bioinformatic Analysis of Functional Characteristics of Enzymatic Active Centres using both Sequence and Structure Information: An Application to the Carnitine/Choline Acyltransferases Protein Family. - Eduardo López-Viñas; Antonio G. Cordente; Montserrat Morillas; Fausto G. Hegardt; Paulino Gómez-Puertas (Spanish Bioinformatics Conference, 2004)

Technical phosphoproteomic and bioinformatic tools useful in cancer research. - Elena López; Jan-Jaap Wesselink; Isabel López; Jesús Mendieta; Paulino Gómez-Puertas; Sarbelio Muñoz (J. Clin. Bioinform., 2011)

MEPSA: minimum energy pathway analysis for energy landscapes. - Iñigo Marcos-Alcalde; Javier Setoain; Jesús I. Mendieta-Moreno; Jesús Mendieta; Paulino Gómez-Puertas (Bioinform., 2015)

MEPSAnd: minimum energy path surface analysis over n-dimensional surfaces. - Iñigo Marcos-Alcalde; Eduardo López-Viñas; Paulino Gómez-Puertas (Bioinform., 2020)