Parallel computing techniques applied to the simultaneous design of structure and material. - Pedro G. Coelho; João B. Cardoso; Paulo Rui Fernandes; Hélder C. Rodrigues (Adv. Eng. Softw., 2011)

Histogram based threshold segmentation of the human femur body for patient specific acquired CT scan images. - Diogo Moreira Campos Ferreira de Almeida; João Orlando Marques Gameiro Folgado; Paulo Rui Fernandes; Rui Miguel Barreiros Ruben (CompIMAGE, 2012)

Computational analysis of polyethylene wear in anatomical and reverse shoulder prostheses. - Carlos Quental 001; João Orlando Marques Gameiro Folgado; Paulo Rui Fernandes; Jacinto Monteiro (Medical Biol. Eng. Comput., 2015)

Special issue: 'CMBBE2018 - 15th international symposium on computer methods in biomechanics and biomedical engineering & 3rd conference on imaging and visualization'. - João Manuel R. S. Tavares; Paulo Rui Fernandes (Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2020)

On the Tortuosity of TPMS Scaffolds for Tissue Engineering. - R. Guerreiro; Tiago Pires; José M. Guedes; Paulo Rui Fernandes; Andre P. G. Castro (Symmetry, 2020)

Modeling the musculoskeletal loading in bone remodeling at the hip of a child. - Pieter-Jan Terryn; Paulo Rui Fernandes; Filipa João; António P. Veloso; Fátima Baptista (Comput. Methods Programs Biomed., 2021)

Axisymmetric Finite Element Modelling of the Human Lens Complex under Cataract Surgery. - M. T. Cardoso; B. Feijóo; Andre P. G. Castro; F. J. Ribeiro; Paulo Rui Fernandes (Symmetry, 2021)

Lumbar intervertebral disc segmentation for computer modeling and simulation. - Rodrigo Matos; Paulo Rui Fernandes; Nuno Matela; Andre P. G. Castro (Comput. Methods Programs Biomed., 2023)

Direct MultiSearch optimization of TPMS scaffolds for bone tissue engineering. - Tiago Pires; Jose Firmino Aguilar Madeira; Andre P. G. Castro; Paulo Rui Fernandes (Comput. Methods Programs Biomed., 2024)

LISBON TPMS TOOL: An open-source tool for the design of TPMS structures for engineering applications. - J. E. Santos; R. B. Ruben; Paulo Rui Fernandes; Andre P. G. Castro (Softw. Impacts, 2025)