Genome inhomogeneity is determined mainly by WW and SS dinucleotides. - C. G. Kozhukhin; Pavel A. Pevzner (Comput. Appl. Biosci., 1991)

Multiple Alignment with Guaranteed Error Bounds and Communication Cost. - Pavel A. Pevzner (CPM, 1992)

Matrix Longest Common Subsequence Problem, Duality and Hibert Bases. - Pavel A. Pevzner; Michael S. Waterman (CPM, 1992)

DNA Physical Mapping, Flows in Networks and Minimum Cycles Mean in Graphs. - Pavel A. Pevzner (Mathematical Methods Of Analysis Of Biopolymer Sequences, 1992)

Extendable words in nucleotide sequences. - Mikhail S. Gelfand; C. G. Kozhukhin; Pavel A. Pevzner (Comput. Appl. Biosci., 1992)

Statistical distance between texts and filtration methods in sequence comparison. - Pavel A. Pevzner (Comput. Appl. Biosci., 1992)

Nucleotide Sequences Versus Markov Models. - Pavel A. Pevzner (Comput. Chem., 1992)

A Fast Filtration Algorithm for the Substring Matching Problem. - Pavel A. Pevzner; Michael S. Waterman (CPM, 1993)

Multiple Sequence Comparison and n-Dimensional Image Reconstruction. - Martin Vingron; Pavel A. Pevzner (CPM, 1993)

Parametric Recomuting in Alignment Graphs. - Xiaoqiu Huang 001; Pavel A. Pevzner; Webb Miller (CPM, 1994)

Towards DNA Sequencing Chips. - Pavel A. Pevzner; Robert J. Lipshutz (MFCS, 1994)

Rearrangements of DNA Sequences and SBH. - Pavel A. Pevzner (Comput. Chem., 1994)

Towards a Computational Theory of Genome Rearrangements. - Sridhar Hannenhalli; Pavel A. Pevzner (Computer Science Today, 1995)

Transforming Men into Mice (Polynomial Algorithm for Genomic Distance Problem). - Sridhar Hannenhalli; Pavel A. Pevzner (FOCS, 1995)

Open Combinatorial Problems in Computational Molecular Biology. - Pavel A. Pevzner; Michael S. Waterman (ISTCS, 1995)

Sorting Permutations by Transpositions. - Vineet Bafna; Pavel A. Pevzner (SODA, 1995)

DNA Physical Mapping and Alternating Eulerian Cycles in Colored Graphs. - Pavel A. Pevzner (Algorithmica, 1995)

Multiple Filtration and Approximate Pattern Matching. - Pavel A. Pevzner; Michael S. Waterman (Algorithmica, 1995)

DNASUN: a package of computer programs for the biotechnology laboratory. - Andrey A. Mironov; N. N. Alexandrov; N. Yu. Bogodarova; A. Grigorjev; V. F. Lebedev; L. V. Lunovskaya; M. E. Truchan; Pavel A. Pevzner (Comput. Appl. Biosci., 1995)

Spliced Alignment: A New Approach to Gene Recognition. - Mikhail S. Gelfand; Andrey A. Mironov; Pavel A. Pevzner (CPM, 1996)

To Cut... or Not to Cut (Applications of Comparative Physical Maps in Molecular Evolution). - Sridhar Hannenhalli; Pavel A. Pevzner (SODA, 1996)

Positional sequencing by hybridization. - Sridhar Hannenhalli; William Feldman; Herbert F. Lewis; Steven Skiena; Pavel A. Pevzner (Comput. Appl. Biosci., 1996)

Genome Rearrangements and Sorting by Reversals. - Vineet Bafna; Pavel A. Pevzner (SIAM J. Comput., 1996)

Gene Hunting without Sequencing Genomis Clones: the "Twenty Questions" game with genes. - Guorong Xu; Sing-Hoi Sze; Cheng-Pin Liu; Pavel A. Pevzner; Norman Arnheim (German Conference on Bioinformatics, 1997)

Software for DNA sequencing by hybridization. - I. Belyi; Pavel A. Pevzner (Comput. Appl. Biosci., 1997)

Las Vegas Algorithms for Gene Recognition: Suboptimal and Error-Tolerant Spliced Alignment. - Sing-Hoi Sze; Pavel A. Pevzner (J. Comput. Biol., 1997)

Selected Papers from RECOMB'97 - Preface. - Michael S. Waterman; Sorin Istrail; Pavel A. Pevzner (J. Comput. Biol., 1997)

Emerging opportunities for theoretical computer science. - Alfred V. Aho; David S. Johnson 001; Richard M. Karp; S. Rao Kosaraju; Catherine C. McGeoch; Christos H. Papadimitriou; Pavel A. Pevzner (SIGACT News, 1997)

Approximation Algorithms for Multiple Sequence Alignment. - Vineet Bafna; Eugene L. Lawler; Pavel A. Pevzner (Theor. Comput. Sci., 1997)

SST versus EST in Gene Recognition (Invited Paper). - Andrey A. Mironov; Pavel A. Pevzner (SPIRE, 1998)

Algorithms and software for support of gene identification experiments. - Sing-Hoi Sze; Mikhail A. Roytberg; Mikhail S. Gelfand; Andrey A. Mironov; Tatiana V. Astakhova; Pavel A. Pevzner (Bioinform., 1998)

Sorting by Transpositions. - Vineet Bafna; Pavel A. Pevzner (SIAM J. Discret. Math., 1998)

Fidelity Probes for DNA Arrays. - Earl Hubbell; Pavel A. Pevzner (ISMB, 1999)

Transforming Cabbage into Turnip: Polynomial Algorithm for Sorting Signed Permutations by Reversals. - Sridhar Hannenhalli; Pavel A. Pevzner (J. ACM, 1999)

De Novo Peptide Sequencing via Tandem Mass Spectrometry. - Vlado Dancík; Theresa A. Addona; Karl R. Clauser; James E. Vath; Pavel A. Pevzner (J. Comput. Biol., 1999)

Computational molecular biology - an algorithmic approach. - Pavel A. Pevzner (MIT Press, 2000)

Combinatorial Approaches to Finding Subtle Signals in DNA Sequences. - Pavel A. Pevzner; Sing-Hoi Sze (ISMB, 2000)

Foreword. - Sorin Istrail; Pavel A. Pevzner; Ron Shamir (Discret. Appl. Math., 2000)

Mutation-Tolerant Protein Identification by Mass Spectrometry. - Pavel A. Pevzner; Vlado Dancík; Chris L. Tang (J. Comput. Biol., 2000)

Fragment assembly with double-barreled data. - Pavel A. Pevzner; Haixu Tang (ISMB (Supplement of Bioinformatics), 2001)

A new approach to fragment assembly in DNA sequencing. - Pavel A. Pevzner; Haixu Tang; Michael S. Waterman (RECOMB, 2001)

A new approach to sequence comparison: normalized sequence alignment. - Abdullah N. Arslan; Ömer Egecioglu; Pavel A. Pevzner (Bioinform., 2001)

The Complexity of Gene Placement. - Leslie Ann Goldberg; Paul W. Goldberg; Mike Paterson; Pavel A. Pevzner; Süleyman Cenk Sahinalp; Elizabeth Sweedyk (J. Algorithms, 2001)

Finding composite regulatory patterns in DNA sequences. - Eleazar Eskin; Pavel A. Pevzner (ISMB, 2002)

Splicing graphs and EST assembly problem. - Steffen Heber; Max A. Alekseyev; Sing-Hoi Sze; Haixu Tang; Pavel A. Pevzner (ISMB, 2002)

EULER-PCR: Finishing Experiments for Repeat Resolution. - Zufar Mulyukov; Pavel A. Pevzner (Pacific Symposium on Biocomputing, 2002)

Finding Weak Motifs in DNA Sequences. - Sing-Hoi Sze; Mikhail S. Gelfand; Pavel A. Pevzner (Pacific Symposium on Biocomputing, 2002)

Border Length Minimization in DNA Array Design. - Andrew B. Kahng; Ion I. Mandoiu; Pavel A. Pevzner; Sherief Reda; Alexander Zelikovsky (WABI, 2002)

Finding motifs in the twilight zone. - Uri Keich; Pavel A. Pevzner (Bioinform., 2002)

U Subtle motifs: defining the limits of motif finding algorithms. - Uri Keich; Pavel A. Pevzner (Bioinform., 2002)

Foreword. - Ming Li; Pavel A. Pevzner; Ron Shamir (J. Comput. Syst. Sci., 2002)

Finding subtle motifs by branching from sample strings. - Alkes L. Price; Sriram Ramabhadran; Pavel A. Pevzner (ECCB, 2003)

Reconstructing tumor genome architectures. - Benjamin J. Raphael; Stanislav Volik; Colin C. Collins; Pavel A. Pevzner (ECCB, 2003)

Genome-Wide Analysis of Bacterial Promoter Regions. - Eleazar Eskin; Uri Keich; Mikhail S. Gelfand; Pavel A. Pevzner (Pacific Symposium on Biocomputing, 2003)

Engineering a scalable placement heuristic for DNA probe arrays. - Andrew B. Kahng; Ion I. Mandoiu; Pavel A. Pevzner; Sherief Reda; Alexander Zelikovsky (RECOMB, 2003)

Transforming men into mice: the Nadeau-Taylor chromosomal breakage model revisited. - Pavel A. Pevzner; Glenn Tesler (RECOMB, 2003)

Genome Halving Problem Revisited. - Max A. Alekseyev; Pavel A. Pevzner (FSTTCS, 2004)

Reconstructing tumor amplisomes. - Benjamin J. Raphael; Pavel A. Pevzner (ISMB/ECCB (Supplement of Bioinformatics), 2004)

De novo repeat classification and fragment assembly. - Pavel A. Pevzner; Haixu Tang; Glenn Tesler (RECOMB, 2004)

Fragment assembly with short reads. - Mark Chaisson; Pavel A. Pevzner; Haixu Tang (Bioinform., 2004)

Educating biologists in the 21st century: bioinformatics scientists versus bioinformatics technicians. - Pavel A. Pevzner (Bioinform., 2004)

Scalable Heuristics for Design of DNA Probe Arrays. - Andrew B. Kahng; Ion I. Mandoiu; Pavel A. Pevzner; Sherief Reda; Alexander Zelikovsky (J. Comput. Biol., 2004)

Identification of Post-Translational Modifications via Blind Search of Mass-Spectra. - Dekel Tsur; Stephen Tanner; Ebrahim Zandi; Vineet Bafna; Pavel A. Pevzner (CSB, 2005)

De novo identification of repeat families in large genomes. - Alkes L. Price; Neil Christopher Jones; Pavel A. Pevzner (ISMB (Supplement of Bioinformatics), 2005)

Peptide Sequence Tags for Fast Database Search in Mass-Spectrometry. - Ari Frank; Stephen Tanner; Pavel A. Pevzner (RECOMB, 2005)

Guest Editors' foreword. - Richard M. Karp; Ming Li; Pavel A. Pevzner; Ron Shamir (J. Comput. Syst. Sci., 2005)

Characterization of Multi-Charge Mass Spectra for Peptide Sequencing. - Ket Fah Chong; Kang Ning 001; Hon Wai Leong; Pavel A. Pevzner (APBC, 2006)

Comparative genomics reveals unusually long motifs in mammalian genomes. - Neil Christopher Jones; Pavel A. Pevzner (ISMB (Supplement of Bioinformatics), 2006)

A New Approach to Protein Identification. - Nuno Bandeira; Dekel Tsur; Ari Frank; Pavel A. Pevzner (RECOMB, 2006)

Representing and comparing protein structures as paths in three-dimensional space. - Degui Zhi; S. Sri Krishna; Haibo Cao; Pavel A. Pevzner; Adam Godzik (BMC Bioinform., 2006)

Modeling and Characterization of Multi-charge Mass Spectra for Peptide Sequencing. - Ket Fah Chong; Kang Ning 001; Hon Wai Leong; Pavel A. Pevzner (J. Bioinform. Comput. Biol., 2006)

The Fragile Breakage versus Random Breakage Models of Chromosome Evolution. - Qian Peng; Pavel A. Pevzner; Glenn Tesler (PLoS Comput. Biol., 2006)

Microinversions in mammalian evolution. - Mark Chaisson; Benjamin J. Raphael; Pavel A. Pevzner (Proc. Natl. Acad. Sci. USA, 2006)

Protein Identification via Spectral Networks Analysis. - Pavel A. Pevzner (APBC, 2007)

Whole genome duplications, multi-break rearrangements, and genome halving problem. - Max A. Alekseyev; Pavel A. Pevzner (SODA, 2007)

Shotgun Protein Sequencing. - Pavel A. Pevzner (WABI, 2007)

Preface. - Sorin Istrail; Pavel A. Pevzner; Ron Shamir (Discret. Appl. Math., 2007)

Special issue on computational molecular biology. - Richard M. Karp; Ming Li; Pavel A. Pevzner; Ron Shamir (J. Comput. Syst. Sci., 2007)

Are There Rearrangement Hotspots in the Human Genome? - Max A. Alekseyev; Pavel A. Pevzner (PLoS Comput. Biol., 2007)

Protein identification by spectral networks analysis. - Nuno Bandeira; Dekel Tsur; Ari Frank; Pavel A. Pevzner (Proc. Natl. Acad. Sci. USA, 2007)

Whole Genome Duplications and Contracted Breakpoint Graphs. - Max A. Alekseyev; Pavel A. Pevzner (SIAM J. Comput., 2007)

Colored de Bruijn Graphs and the Genome Halving Problem. - Max A. Alekseyev; Pavel A. Pevzner (IEEE ACM Trans. Comput. Biol. Bioinform., 2007)

Correcting Base-Assignment Errors in Repeat Regions of Shotgun Assembly. - Degui Zhi; Uri Keich; Pavel A. Pevzner; Steffen Heber; Haixu Tang (IEEE ACM Trans. Comput. Biol. Bioinform., 2007)

Multi-spectra peptide sequencing and its applications to multistage mass spectrometry. - Nuno Bandeira; Jesper V. Olsen; Matthias Mann 002; Pavel A. Pevzner (ISMB, 2008)

De Novo Sequencing of Nonribosomal Peptides. - Nuno Bandeira; Julio Ng; Dario Meluzzi; Roger G. Linington; Pieter C. Dorrestein; Pavel A. Pevzner (RECOMB, 2008)

Multi-break rearrangements and chromosomal evolution. - Max A. Alekseyev; Pavel A. Pevzner (Theor. Comput. Sci., 2008)

Session Introduction. - Bernard M. E. Moret; Webb Miller; Pavel A. Pevzner; David Sankoff (Pacific Symposium on Biocomputing, 2009)

Decoding Synteny Blocks and Large-Scale Duplications in Mammalian and Plant Genomes. - Qian Peng; Max A. Alekseyev; Glenn Tesler; Pavel A. Pevzner (WABI, 2009)

Limited Lifespan of Fragile Regions in Mammalian Evolution. - Max A. Alekseyev; Pavel A. Pevzner (RECOMB-CG, 2010)

Gapped Spectral Dictionaries and Their Applications for Database Searches of Tandem Mass Spectra. - Kyowon Jeong 001; Sangtae Kim; Nuno Bandeira; Pavel A. Pevzner (RECOMB, 2010)

DRIMM-Synteny: decomposing genomes into evolutionary conserved segments. - Son K. Pham; Pavel A. Pevzner (Bioinform., 2010)

Decoding the Genomic Architecture of Mammalian and Plant Genomes: Synteny Blocks and Large-scale Duplications. - Max A. Alekseyev; Qian Peng; Pavel A. Pevzner; Glenn Tesler (Commun. Inf. Syst., 2010)

Blocked Pattern Matching Problem and Its Applications in Proteomics. - Julio Ng; Amihood Amir; Pavel A. Pevzner (RECOMB, 2011)

Error correction of high-throughput sequencing datasets with non-uniform coverage. - Paul Medvedev; Eric Scott; Boyko Kakaradov; Pavel A. Pevzner (Bioinform., 2011)

Paired de Bruijn Graphs: A Novel Approach for Incorporating Mate Pair Information into Genome Assemblers. - Paul Medvedev; Son K. Pham; Mark Chaisson; Glenn Tesler; Pavel A. Pevzner (J. Comput. Biol., 2011)

Multiplex De Novo Sequencing of Peptide Antibiotics. - Hosein Mohimani; Wei-Ting Liu; Yu-Liang Yang; Susana P. Gaudêncio; William Fenical; Pieter C. Dorrestein; Pavel A. Pevzner (J. Comput. Biol., 2011)

Preface: 2nd Satellite Meeting on Bioinformatics Education, Research in Computational Molecular Biology (RECOMB-BE 2010). - Pavel A. Pevzner; Ron Shamir (J. Comput. Biol., 2011)

Keynote: De novo sequencing of novel peptide antibiotics by tandem mass spectrometry. - Pavel A. Pevzner (ICCABS, 2012)

MS-DPR: An Algorithm for Computing Statistical Significance of Spectral Identifications of Non-linear Peptides. - Hosein Mohimani; Sangtae Kim; Pavel A. Pevzner (WABI, 2012)

From de Bruijn Graphs to Rectangle Graphs for Genome Assembly. - Nikolay Vyahhi; Alex Pyshkin; Son K. Pham; Pavel A. Pevzner (WABI, 2012)

SEQuel: improving the accuracy of genome assemblies. - Roy Ronen; Christina Boucher 001; Hamidreza Chitsaz; Pavel A. Pevzner (Bioinform., 2012)

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing. - Anton Bankevich; Sergey Nurk; Dmitry Antipov; Alexey A. Gurevich; Mikhail Dvorkin; Alexander S. Kulikov; Valery M. Lesin; Sergey I. Nikolenko; Son K. Pham; Andrey D. Prjibelski; Alex Pyshkin; Alexander Sirotkin 001; et al. (J. Comput. Biol., 2012)

UniNovo: A Universal Tool for de Novo Peptide Sequencing. - Kyowon Jeong 001; Sangtae Kim; Pavel A. Pevzner (RECOMB, 2013)

Identification of Ultramodified Proteins Using Top-Down Spectra. - Xiaowen Liu; Shawna Hengel; Si Wu; Nikola Tolic; Ljiljana Pasa-Tolic; Pavel A. Pevzner (RECOMB, 2013)

Assembling Genomes and Mini-metagenomes from Highly Chimeric Reads. - Sergey Nurk; Anton Bankevich; Dmitry Antipov; Alexey A. Gurevich; Anton I. Korobeynikov; Alla L. Lapidus; Andrey D. Prjibelsky; Alex Pyshkin; Alexander Sirotkin 001; Yakov Sirotkin; Ramunas Stepanauskas; Jeffrey S. McLean; et al. (RECOMB, 2013)

MORPH-PRO: a novel algorithm and web server for protein morphing. - Natalie Castellana; Andrey Lushnikov; Piotr Rotkiewicz; Natasha Sefcovic; Pavel A. Pevzner; Adam Godzik; Kira Vyatkina (Algorithms Mol. Biol., 2013)

UniNovo: a universal tool for de novo peptide sequencing. - Kyowon Jeong 001; Sangtae Kim; Pavel A. Pevzner (Bioinform., 2013)

Assembling Single-Cell Genomes and Mini-Metagenomes From Chimeric MDA Products. - Sergey Nurk; Anton Bankevich; Dmitry Antipov; Alexey A. Gurevich; Anton I. Korobeynikov; Alla L. Lapidus; Andrey D. Prjibelski; Alex Pyshkin; Alexander Sirotkin 001; Yakov Sirotkin; Ramunas Stepanauskas; Scott R. Clingenpeel; et al. (J. Comput. Biol., 2013)

Pathset Graphs: A Novel Approach for Comprehensive Utilization of Paired Reads in Genome Assembly. - Son K. Pham; Dmitry Antipov; Alexander Sirotkin 001; Glenn Tesler; Pavel A. Pevzner; Max A. Alekseyev (J. Comput. Biol., 2013)

Manifold de Bruijn Graphs. - Yu Lin 001; Pavel A. Pevzner (WABI, 2014)

ExSPAnder: a universal repeat resolver for DNA fragment assembly. - Andrey D. Prjibelski; Irina Vasilinetc; Anton Bankevich; Alexey A. Gurevich; Tatiana Krivosheeva; Sergey Nurk; Son K. Pham; Anton I. Korobeynikov; Alla L. Lapidus; Pavel A. Pevzner (Bioinform., 2014)

IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis. - Yana Safonova; Stefano Bonissone; Eugene Kurpilyansky; Ekaterina Starostina; Alla L. Lapidus; Jeremy Stinson; Laura DePalatis; Wendy Sandoval; Jennie Lill; Pavel A. Pevzner (Bioinform., 2015)

Assembling short reads from jumping libraries with large insert sizes. - Irina Vasilinetc; Andrey D. Prjibelski; Alexey A. Gurevich; Anton I. Korobeynikov; Pavel A. Pevzner (Bioinform., 2015)

Life after MOOCs. - Phillip E. C. Compeau; Pavel A. Pevzner (Commun. ACM, 2015)

dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes. - Yana Safonova; Anton Bankevich; Pavel A. Pevzner (J. Comput. Biol., 2015)

Assembly of Long Error-Prone Reads Using de Bruijn Graphs. - Yu Lin 001; Max W. Shen; Jeffrey Yuan; Mark Chaisson; Pavel A. Pevzner (RECOMB, 2016)

metaSPAdes: A New Versatile de novo Metagenomics Assembler. - Sergey Nurk; Dmitry Meleshko; Anton I. Korobeynikov; Pavel A. Pevzner (RECOMB, 2016)

plasmidSPAdes: assembling plasmids from whole genome sequencing data. - Dmitry Antipov; Nolan Hartwick; Max W. Shen; Mikhail Raiko; Alla L. Lapidus; Pavel A. Pevzner (Bioinform., 2016)

hybridSPAdes: an algorithm for hybrid assembly of short and long reads. - Dmitry Antipov; Anton I. Korobeynikov; Jeffrey S. McLean; Pavel A. Pevzner (Bioinform., 2016)

Top-down analysis of protein samples by de novo sequencing techniques. - Kira Vyatkina; Si Wu; Lennard J. Dekker; Martijn M. VanDuijn; Xiaowen Liu; Nikola Tolic; Theo M. Luider; Ljiljana Pasa-Tolic; Pavel A. Pevzner (Bioinform., 2016)

Immunoglobulin Classification Using the Colored Antibody Graph. - Stefano Bonissone; Pavel A. Pevzner (J. Comput. Biol., 2016)

Assembly of long error-prone reads using de Bruijn graphs. - Yu Lin 001; Jeffrey Yuan; Mikhail Kolmogorov; Max W. Shen; Mark Chaisson; Pavel A. Pevzner (Proc. Natl. Acad. Sci. USA, 2016)

Reconstructing Antibody Repertoires from Error-Prone Immunosequencing Datasets. - Alexander Shlemov; Sergey Bankevich; Andrey V. Bzikadze; Yana Safonova; Pavel A. Pevzner (RECOMB, 2017)

Single-molecule protein identification by sub-nanopore sensors. - Mikhail Kolmogorov; Eamonn Kennedy; Zhuxin Dong; Gregory Timp; Pavel A. Pevzner (PLoS Comput. Biol., 2017)

Long Reads Enable Accurate Estimates of Complexity of Metagenomes. - Anton Bankevich; Pavel A. Pevzner (RECOMB, 2018)

Assembly of Long Error-Prone Reads Using Repeat Graphs. - Mikhail Kolmogorov; Jeffrey Yuan; Yu Lin 001; Pavel A. Pevzner (RECOMB, 2018)

Bioinformatics: a Servant or the Queen of Molecular Biology? - Pavel A. Pevzner (BIBM, 2019)

De Novo Peptide Sequencing Reveals a Vast Cyclopeptidome in Human Gut and Other Environments. - Bahar Behsaz; Hosein Mohimani; Alexey A. Gurevich; Andrey D. Prjibelski; Mark F. Fisher; Larry Smarr; Pieter C. Dorrestein; Joshua S. Mylne; Pavel A. Pevzner (RECOMB, 2019)

cloudSPAdes: assembly of synthetic long reads using de Bruijn graphs. - Ivan Tolstoganov; Anton Bankevich; Zhoutao Chen; Pavel A. Pevzner (Bioinform., 2019)

MosaicFlye: Resolving Long Mosaic Repeats Using Long Reads. - Anton Bankevich; Pavel A. Pevzner (RECOMB, 2020)

Metaviral SPAdes: assembly of viruses from metagenomic data. - Dmitry Antipov; Mikhail Raiko; Alla L. Lapidus; Pavel A. Pevzner (Bioinform., 2020)

The string decomposition problem and its applications to centromere analysis and assembly. - Tatiana Dvorkina; Andrey V. Bzikadze; Pavel A. Pevzner (Bioinform., 2020)

TandemTools: mapping long reads and assessing/improving assembly quality in extra-long tandem repeats. - Alla Mikheenko; Andrey V. Bzikadze; Alexey A. Gurevich; Karen H. Miga; Pavel A. Pevzner (Bioinform., 2020)

Automated analysis of immunosequencing datasets reveals novel immunoglobulin D genes across diverse species. - Vinnu Bhardwaj; Massimo Franceschetti; Ramesh Rao; Pavel A. Pevzner; Yana Safonova (PLoS Comput. Biol., 2020)

CentromereArchitect: inference and analysis of the architecture of centromeres. - Tatiana Dvorkina; Olga Kunyavskaya; Andrey V. Bzikadze; Ivan V. Alexandrov; Pavel A. Pevzner (Bioinform., 2021)

Trace Reconstruction Problems in Computational Biology. - Vinnu Bhardwaj; Pavel A. Pevzner; Cyrus Rashtchian; Yana Safonova (IEEE Trans. Inf. Theory, 2021)

Special Issue: Professor Michael Waterman's 80th Birthday, Part 1. - Sorin Istrail; Pavel A. Pevzner; Fengzhu Sun; Martin Vingron (J. Comput. Biol., 2022)

Michael Waterman's Contributions to Computational Biology and Bioinformatics. - Pavel A. Pevzner; Martin Vingron; Christian M. Reidys; Fengzhu Sun; Sorin Istrail (J. Comput. Biol., 2022)