Reconstruction of the chromatin 3D conformation from single cell Hi-C data. - Pavel I. Kos; Aleksandra A. Galitsyna; Sergey V. Ulianov; Mikhail S. Gelfand; Sergey V. Razin; Alexander V. Chertovich (BIBM, 2018)

Homopolymer with intrachain reversible bonds as a model of large-scale chromatin organization and dynamics. - Artem Petrov; Pavel Kos; Alexander Chertovich (BIBM, 2018)

Nuclear lamina maintains global spatial organization of chromatin in Drosophila cultured cells. - Sergey V. Ulianov; Semen A. Doronin; Ekaterina E. Khrameeva; Pavel I. Kos; Sergey S. Starikov; Aleksandra A. Galitsyna; Artem Luzhin; Mikhail S. Gelfand; Alexander V. Chertovich; Sergey V. Razin; Yuri Y. Shevelyov (BIBM, 2018)

Micellar polymerization: Computer simulations by dissipative particle dynamics. - Ruslan Shupanov; Alexander Chertovich; Pavel Kos (J. Comput. Chem., 2018)

Perspectives for the reconstruction of 3D chromatin conformation using single cell Hi-C data. - Pavel I. Kos; Aleksandra A. Galitsyna; Sergey V. Ulianov; Mikhail S. Gelfand; Sergey V. Razin; Alexander V. Chertovich (PLoS Comput. Biol., 2021)

Circuits of space and time quantum channels. - Pavel Kos; Georgios Styliaris (Quantum, 2023)

Hierarchical generalization of dual unitarity. - Xie-Hang Yu; Zhiyuan Wang; Pavel Kos (Quantum, 2024)

Can Theoretical Physics Research Benefit from Language Agents? - Sirui Lu; Zhijing Jin 001; Terry Jingchen Zhang; Pavel Kos; J. Ignacio Cirac; Bernhard Schölkopf (CoRR, 2025)