Prediction of Protein Structure by Template-Based Modeling Combined with the UNRES Force Field. - Pawel Krupa; Magdalena A. Mozolewska; Keehyoung Joo; Jooyoung Lee 002; Cezary Czaplewski; Adam Liwo (J. Chem. Inf. Model., 2015)

Performance of protein-structure predictions with the physics-based UNRES force field in CASP11. - Pawel Krupa; Magdalena A. Mozolewska; Marta Wisniewska; Yanping Yin; Yi He; Adam K. Sieradzan; Robert Ganzynkowicz; Agnieszka G. Lipska; Agnieszka S. Karczynska; Magdalena Slusarz; Rafal Slusarz; Artur Gieldon; et al. (Bioinform., 2016)

Use of Restraints from Consensus Fragments of Multiple Server Models To Enhance Protein-Structure Prediction Capability of the UNRES Force Field. - Magdalena A. Mozolewska; Pawel Krupa; Bartlomiej Zaborowski; Adam Liwo; Jooyoung Lee 002; Keehyoung Joo; Cezary Czaplewski (J. Chem. Inf. Model., 2016)

Ergodicity and model quality in template-restrained canonical and temperature/Hamiltonian replica exchange coarse-grained molecular dynamics simulations of proteins. - Agnieszka S. Karczynska; Cezary Czaplewski; Pawel Krupa; Magdalena A. Mozolewska; Keehyoung Joo; Jooyoung Lee 002; Adam Liwo (J. Comput. Chem., 2017)

Maximum Likelihood Calibration of the UNRES Force Field for Simulation of Protein Structure and Dynamics. - Pawel Krupa; Anna Halabis; Wioletta Zmudzinska; Stanislaw Oldziej; Harold A. Scheraga; Adam Liwo (J. Chem. Inf. Model., 2017)

Correction to Maximum Likelihood Calibration of the UNRES Force Field for Simulation of Protein Structure and Dynamics. - Pawel Krupa; Anna Halabis; Wioletta Zmudzinska; Stanislaw Oldziej; Harold A. Scheraga; Adam Liwo (J. Chem. Inf. Model., 2018)

High Performance Computing with Coarse Grained Model of Biological Macromolecules. - Emilia A. Lubecka; Adam K. Sieradzan; Cezary Czaplewski; Pawel Krupa; Adam Liwo (Supercomput. Front. Innov., 2018)

Improved Consensus-Fragment Selection in Template-Assisted Prediction of Protein Structures with the UNRES Force Field in CASP13. - Agnieszka S. Karczynska; Karolina Zieba; Urszula Uciechowska; Magdalena A. Mozolewska; Pawel Krupa; Emilia A. Lubecka; Agnieszka G. Lipska; Celina Sikorska; Sergey A. Samsonov; Adam K. Sieradzan; Artur Gieldon; Adam Liwo; et al. (J. Chem. Inf. Model., 2020)

UNRES-Dock - protein-protein and peptide-protein docking by coarse-grained replica-exchange MD simulations. - Pawel Krupa; Agnieszka S. Karczynska; Magdalena A. Mozolewska; Adam Liwo; Cezary Czaplewski (Bioinform., 2021)