Optimizing bioinformatics workflows for data analysis using cloud management techniques. - Vincent C. Emeakaroha; Pawel P. Labaj; Michael Maurer; Ivona Brandic; David P. Kreil (WORKS@SC, 2011)

Characterization and improvement of RNA-Seq precision in quantitative transcript expression profiling. - Pawel P. Labaj; Germán G. Leparc; Bryan E. Linggi; Lye Meng Markillie; H. Steven Wiley; David P. Kreil (Bioinform., 2011)

An analysis of single amino acid repeats as use case for application specific background models. - Pawel P. Labaj; Peter Sykacek; David P. Kreil (BMC Bioinform., 2011)

Measurement and data analysis in the face of noise and complex backgrounds - advances from improved bioinformatics algorithms. - Pawel P. Labaj (2012)

Messungen und Datenanalyse in Anbetracht von Rauschen und komplexem Bias - Fortschritte aus verbesserten bioinformatischen Algorithmen. - Pawel P. Labaj (Ausgezeichnete Informatikdissertationen, 2012)

Managing and Optimizing Bioinformatics Workflows for Data Analysis in Clouds. - Vincent C. Emeakaroha; Michael Maurer; Patrick Stern; Pawel P. Labaj; Ivona Brandic; David P. Kreil (J. Grid Comput., 2013)

VirulentHunter: deep learning-based virulence factor predictor illuminates pathogenicity in diverse microbial contexts. - Chen Chen; Yong Xu; Jian Ouyang; Xiangyi Xiong; Pawel P. Labaj; Agnieszka Chmielarczyk; Anna Rózanska; Hao Zhang; Keyang Liu; Tieliu Shi; Jun Wu (Briefings Bioinform., 2025)